RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 STRADAQ7RTN6 431 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 FUKQ8N0W3 1084 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 CNPY4Q8N129 248 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 VPS52Q8N1B4 723 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 CCDC185Q8N715 623 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 DENND1AQ8TEH3 1009 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 CSPG4P5Q96PW8 444 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 HNRNPABQ99729 332 aaKnown RBP12.51□□□□□ -0.41
HMGCL-202ENST00000374487 LRRC4Q9HBW1 653 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 ETNK2Q9NVF9 386 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 KLHL14Q9P2G3 628 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 TEX264Q9Y6I9 313 aa12.51□□□□□ -0.41
HMGCL-202ENST00000374487 RALGAPA2Q2PPJ7 1873 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 TCRBV9S1A1TA0A576 114 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 CLDN5O00501 218 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 TYROBPO43914 113 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 INHBAP08476 426 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 YWHAZP63104 245 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 DEFB103AP81534 67 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 DNAJC3Q13217 504 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 XRCC4Q13426 336 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 LPIN1Q14693 890 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SLC25A52Q3SY17 297 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SLC45A4Q5BKX6 768 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 RSPH3Q86UC2 560 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 OSTM1Q86WC4 334 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 FAM131BQ86XD5 332 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 HACE1Q8IYU2 909 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SIX6OS1Q8N1H7 587 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 LRRC8CQ8TDW0 803 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 CFAP36Q96G28 342 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 FAM161BQ96MY7 647 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 DHRS4Q9BTZ2 278 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 MAGEB5Q9BZ81 275 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 ETNK1Q9HBU6 452 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 ABCF3Q9NUQ8 709 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SLC38A7Q9NVC3 462 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 GGT7Q9UJ14 662 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 TANC1Q9C0D5 1861 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SYNJ2BP-COX16A0A087WUM0 186 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 IQANK1A0A1B0GTG1 560 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 PTGESO14684 152 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 ZWINTO95229 277 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 MT-ND3P03897 115 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 NPR3P17342 541 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 LRPAP1P30533 357 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 MRPS6P82932 125 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 KBTBD12Q3ZCT8 623 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 RASIP1Q5U651 963 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 HEATR6Q6AI08 1181 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 FAM117BQ6P1L5 589 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 KCNT2Q6UVM3 1135 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 CCDC33Q8N5R6 958 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 DCAKDQ8WVC6 231 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 NDRG1Q92597 394 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 PPP1R10Q96QC0 940 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 KCTD15Q96SI1 283 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 TSPYL2Q9H2G4 693 aaPredicted RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 SSU72Q9NP77 194 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 COX16Q9P0S2 106 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 ZC3H7BQ9UGR2 993 aaKnown RBP12.5□□□□□ -0.41
HMGCL-202ENST00000374487 EYSQ5T1H1 3165 aa12.5□□□□□ -0.41
HMGCL-202ENST00000374487 GOLGA8RI6L899 631 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 CXCL10P02778 98 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 GSTA1P08263 222 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 GOT1P17174 413 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 AMPD1P23109 780 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 CD52P31358 61 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 MLH1P40692 756 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 MRPS5P82675 430 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 SLC10A2Q12908 348 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 SLC1A5Q15758 541 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 PDK4Q16654 411 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 MDH1BQ5I0G3 518 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 LVRNQ6Q4G3 990 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 BZW1Q7L1Q6 419 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 SPRED2Q7Z698 418 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 PYROXD2Q8N2H3 581 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 GBP7Q8N8V2 638 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 HERVK_113Q902F9 699 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 ALKBH8Q96BT7 664 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 MTMR10Q9NXD2 777 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 ST3GAL5Q9UNP4 418 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 GCATO75600 419 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 BEST1O76090 585 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 THP07101 528 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 FAM200BP0CF97 657 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 IBSPP21815 317 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 HNRNPH1P31943 449 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 MAP3K7CLP57077 242 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 FAM26DQ5JW98 314 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 PSRC1Q6PGN9 363 aaPredicted RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 CTAGE3PQ8IX95 158 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 CCDC63Q8NA47 563 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 TFB1MQ8WVM0 346 aaKnown RBP12.49□□□□□ -0.41
HMGCL-202ENST00000374487 SENP8Q96LD8 212 aa12.49□□□□□ -0.41
HMGCL-202ENST00000374487 KLF6Q99612 283 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms