RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 HNRNPH2P55795 449 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 ZNF449Q6P9G9 518 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 C1orf228Q6PIY5 440 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 RGS9BPQ6ZS82 235 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 ZNF683Q8IZ20 524 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 ZNF276Q8N554 614 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 C9orf72Q96LT7 481 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 XPO6Q96QU8 1125 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 IGSF9Q9P2J2 1179 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 SCML2Q9UQR0 700 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FAM72CH0Y354 149 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 SUN1O94901 812 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 USP17L7P0C7H9 530 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 PPIDQ08752 370 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 GALNT2Q10471 571 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 WASHC5Q12768 1159 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FAM72AQ5TYM5 149 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FAM72DQ6L9T8 149 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 SCYL2Q6P3W7 929 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FOXR1Q6PIV2 292 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 KCNT2Q6UVM3 1135 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 LEKR1Q6ZMV7 388 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 TAOK1Q7L7X3 1001 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 SCD5Q86SK9 330 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 CCDC25Q86WR0 208 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FAM72BQ86X60 149 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 FAM131BQ86XD5 332 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 ATP11CQ8NB49 1132 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 DCAKDQ8WVC6 231 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 HAPLN3Q96S86 360 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 MED10Q9BTT4 135 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 OBSL1O75147 1896 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 A0A0A0MRY4 1105 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 PARNO95453 639 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 OAS1P00973 400 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 DEUP1Q05D60 604 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 TNK2Q07912 1038 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 BRMS1LQ5PSV4 323 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 C4orf50Q6ZRC1 276 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 YTHDF3Q7Z739 585 aaKnown RBP13□□□□□ -0.33
PRPF4-202ENST00000374199 THEM5Q8N1Q8 247 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 HDAC11Q96DB2 347 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 SPATA13Q96N96 652 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 CTNNAL1Q9UBT7 734 aa13□□□□□ -0.33
PRPF4-202ENST00000374199 WASH4PA8MWX3 477 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 I3L4J1 428 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 NCAM2O15394 837 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 KCNN4O15554 427 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TYROBPO43914 113 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 ALDH1A2O94788 518 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 METTL18O95568 372 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 CHN1P15882 459 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 DRD4P21917 467 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 PDIA2Q13087 525 aaKnown RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 BFSP2Q13515 415 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 MPP2Q14168 576 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 ZFYVE27Q5T4F4 411 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 ZC3H18Q86VM9 953 aaKnown RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 NLRP14Q86W24 1093 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 URGCPQ8TCY9 931 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 HTR3CQ8WXA8 447 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TMPRSS4Q9NRS4 437 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 SENP1Q9P0U3 644 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 FNIP2Q9P278 1114 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TTLL3Q9Y4R7 772 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 GMNCA6NCL1 334 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 IRAK2O43187 625 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 OPHN1O60890 802 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 AMPD1P23109 780 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 BDNFP23560 247 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 YWHAHQ04917 246 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 PPP2R5DQ14738 602 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 KCTD11Q693B1 232 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TAC4Q86UU9 113 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 CCDC13Q8IYE1 715 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 ZBED8Q8IZ13 594 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TFB1MQ8WVM0 346 aaKnown RBP12.99□□□□□ -0.33
PRPF4-202ENST00000374199 SLC39A13Q96H72 371 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 SPATA17Q96L03 361 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 SIGLEC10Q96LC7 697 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 TOX2Q96NM4 488 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 ZNF180Q9UJW8 692 aa12.99□□□□□ -0.33
PRPF4-202ENST00000374199 FDFT1P37268 417 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 GEMIN4P57678 1058 aaKnown RBP12.98□□□□□ -0.33
PRPF4-202ENST00000374199 BSPRYQ5W0U4 402 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 PIGWQ7Z7B1 504 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 DQX1Q8TE96 717 aaKnown RBP12.98□□□□□ -0.33
PRPF4-202ENST00000374199 ARHGEF2Q92974 986 aaKnown RBP12.98□□□□□ -0.33
PRPF4-202ENST00000374199 TSGA13Q96PP4 275 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 CCT8L2Q96SF2 557 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 ETNK1Q9HBU6 452 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 DNAJB4Q9UDY4 337 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 NOD1Q9Y239 953 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 TRDMT1O14717 391 aaKnown RBP12.98□□□□□ -0.33
PRPF4-202ENST00000374199 IFNB1P01574 187 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 IGLV3-27P01718 113 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 ZDHHC11BP0C7U3 371 aa12.98□□□□□ -0.33
PRPF4-202ENST00000374199 ARL4AP40617 200 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms