RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ATP11CQ8NB49 1132 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 CCDC110Q8TBZ0 833 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 ANLNQ9NQW6 1124 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 ABCC13Q9NSE7 274 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 LGALS13Q9UHV8 139 aa25.83■■□□□ 1.73
CTSA-203ENST00000372459 ZMYND8Q9ULU4 1186 aaPredicted RBP25.83■■□□□ 1.73
CTSA-203ENST00000372459 EXOC1LA0A1B0GW35 172 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 SRRM3A6NNA2 597 aaPredicted RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 BANF1O75531 89 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 PHBP35232 272 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 HCAR3P49019 387 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 IFRD2Q12894 506 aaPredicted RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 BBS9Q3SYG4 887 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 NPAS4Q8IUM7 802 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 SCN4BQ8IWT1 228 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 DQX1Q8TE96 717 aaKnown RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 SELENOSQ9BQE4 189 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 BEGAINQ9BUH8 593 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 TKTL2Q9H0I9 626 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 CTNNAL1Q9UBT7 734 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 DCLK1O15075 740 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 MAGEA6P43360 314 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 GATMP50440 423 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 TPI1P60174 286 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 CTXN3Q4LDR2 81 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 FAM171A1Q5VUB5 890 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 VSTM1Q6UX27 236 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 PDZD4Q76G19 769 aaPredicted RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 EXOC3L1Q86VI1 746 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 CEP57Q86XR8 500 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 VPS52Q8N1B4 723 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 CCDC33Q8N5R6 958 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 HTR3CQ8WXA8 447 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 ARHGEF2Q92974 986 aaKnown RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 FERMT1Q9BQL6 677 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 MRPL9Q9BYD2 267 aaKnown RBP25.82■■□□□ 1.72
CTSA-203ENST00000372459 HIPK3Q9H422 1215 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 PPCSQ9HAB8 311 aa25.82■■□□□ 1.72
CTSA-203ENST00000372459 FAM72CH0Y354 149 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 I6L893 689 aaPredicted RBP25.81■■□□□ 1.72
CTSA-203ENST00000372459 PARNO95453 639 aaKnown RBP25.81■■□□□ 1.72
CTSA-203ENST00000372459 PDK1Q15118 436 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 TCTN1Q2MV58 587 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 FAM72AQ5TYM5 149 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 BTBD8Q5XKL5 378 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 FAM72DQ6L9T8 149 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 CAPN12Q6ZSI9 719 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 FAM72BQ86X60 149 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 FBXO36Q8NEA4 188 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 RNF34Q969K3 372 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 SCLYQ96I15 445 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 ETNK1Q9HBU6 452 aa25.81■■□□□ 1.72
CTSA-203ENST00000372459 ATXN2Q99700 1313 aaKnown RBP25.81■■□□□ 1.72
CTSA-203ENST00000372459 PPP1R12AO14974 1030 aaPredicted RBP25.8■■□□□ 1.72
CTSA-203ENST00000372459 TSHRP16473 764 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 ATN1P54259 1190 aaPredicted RBP25.8■■□□□ 1.72
CTSA-203ENST00000372459 MRPL58Q14197 206 aaKnown RBP25.8■■□□□ 1.72
CTSA-203ENST00000372459 ZNF280DQ6N043 979 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 ANKRD33Q7Z3H0 272 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 PCDHB5Q9Y5E4 795 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 CLUHO75153 1309 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 TTC3P53804 2025 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 OR6C75A6NL08 312 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 IGLV3-25P01717 112 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 ERCC2P18074 760 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 SLC11A1P49279 550 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 GPX6P59796 221 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 CBLBQ13191 982 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 CCDC38Q502W7 563 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 TDRPQ86YL5 185 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 PALM2Q8IXS6 379 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 CRIPAKQ8N1N5 446 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 C8orf48Q96LL4 319 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 LGMNQ99538 433 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 EPAS1Q99814 870 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 GPR62Q9BZJ7 368 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 EPN3Q9H201 632 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 RAD54BQ9Y620 910 aa25.8■■□□□ 1.72
CTSA-203ENST00000372459 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.79■■□□□ 1.72
CTSA-203ENST00000372459 STK10O94804 968 aaKnown RBP25.79■■□□□ 1.72
CTSA-203ENST00000372459 CXCL10P02778 98 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 VAV1P15498 845 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 ATP2A2P16615 1042 aaKnown RBP25.79■■□□□ 1.72
CTSA-203ENST00000372459 PPARDQ03181 441 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 PRKD1Q15139 912 aaPredicted RBP25.79■■□□□ 1.72
CTSA-203ENST00000372459 FAXCQ5TGI0 409 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 ARHGEF18Q6ZSZ5 1173 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 WDR83Q9BRX9 315 aaKnown RBP25.79■■□□□ 1.72
CTSA-203ENST00000372459 TMEM175Q9BSA9 504 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 TANC1Q9C0D5 1861 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 MARCH5Q9NX47 278 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 TET1Q8NFU7 2136 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 VWA8A3KMH1 1905 aa25.79■■□□□ 1.72
CTSA-203ENST00000372459 ZNF189O75820 626 aaPredicted RBP25.78■■□□□ 1.72
CTSA-203ENST00000372459 AMHP03971 560 aa25.78■■□□□ 1.72
CTSA-203ENST00000372459 APRTP07741 180 aa25.78■■□□□ 1.72
CTSA-203ENST00000372459 FGFR3P22607 806 aa25.78■■□□□ 1.72
CTSA-203ENST00000372459 GLUD2P49448 558 aa25.78■■□□□ 1.72
CTSA-203ENST00000372459 CCL23P55773 120 aa25.78■■□□□ 1.72
CTSA-203ENST00000372459 ELAVL2Q12926 359 aaKnown RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms