RNA–Protein interactions for RNA: ENST00000370576.8

MCF2-203, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MCF2, Length 3,688 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-203ENST00000370576 MYCP01106 439 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 RARGP13631 454 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ITGB5P18084 799 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SYKP43405 635 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 MRPL12P52815 198 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 ACTR1AP61163 376 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PSMC6P62333 389 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 KCNJ10P78508 379 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GTF2BQ00403 316 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ALCAMQ13740 583 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GIT2Q14161 759 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SURF1Q15526 300 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ABHD15Q6UXT9 468 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 H1FNTQ75WM6 255 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 ZNF280CQ8ND82 737 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 OR2W6PQ8NHA6 318 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TBCKQ8TEA7 893 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 FAM216AQ8WUB2 273 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 USP7Q93009 1102 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 APIPQ96GX9 242 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 HS6ST2Q96MM7 605 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 UIMC1Q96RL1 719 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SH3GL1Q99961 368 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SPXQ9BT56 116 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TMEM39BQ9GZU3 492 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 SIX2Q9NPC8 291 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 RMND1Q9NWS8 449 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.1□□□□□ -1.75
MCF2-203ENST00000370576 ITGB1BP2Q9UKP3 347 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PNMA3Q9UL41 463 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 LIPT1Q9Y234 373 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ATP11BQ9Y2G3 1177 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PCDHB14Q9Y5E9 798 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CITO14578 2027 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 H7C1D1 291 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ARHGAP33O14559 1287 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 FANCGO15287 622 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 PRDM1O75626 825 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GH2P01242 217 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 FERP16591 822 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CST5P28325 142 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 PTPN4P29074 926 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 RNF144AP50876 292 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 FSTL1Q12841 308 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ITGB3BPQ13352 177 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 TESK1Q15569 626 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 C1orf220Q5T0J3 134 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 FYB2Q5VWT5 728 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 DARS2Q6PI48 645 aaKnown RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 TRAT1Q6PIZ9 186 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ANKS1BQ7Z6G8 1248 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ADGRG6Q86SQ4 1221 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CDH26Q8IXH8 852 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CCDC170Q8IYT3 715 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 IQUBQ8NA54 791 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GALNT6Q8NCL4 622 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CLIC6Q96NY7 704 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 KCNC2Q96PR1 638 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 GPR88Q9GZN0 384 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TAF1DQ9H5J8 278 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 WDR26Q9H7D7 661 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CABP5Q9NP86 173 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 NDFIP2Q9NV92 336 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CYP39A1Q9NYL5 469 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ACTR3BQ9P1U1 418 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 WRAP73Q9P2S5 460 aaPredicted RBP4.1□□□□□ -1.75
MCF2-203ENST00000370576 SERTAD1Q9UHV2 236 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 ZNF281Q9Y2X9 895 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 TRIM17Q9Y577 477 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 COL4A3Q01955 1670 aa4.1□□□□□ -1.75
MCF2-203ENST00000370576 CAPN8A6NHC0 703 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 FAM177BA6PVY3 158 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 HAS3O00219 553 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 GFRA2O00451 464 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 CES2O00748 559 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 KIAA0355O15063 1070 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 ONECUT2O95948 504 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 EFEMP2O95967 443 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 CHRNA1P02708 482 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 ABCB1P08183 1280 aaPredicted RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 JMJD7P0C870 316 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 SFPQP23246 707 aaKnown RBP eCLIP4.09□□□□□ -1.75
MCF2-203ENST00000370576 RPL9P32969 192 aaKnown RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 PRKCIP41743 596 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 ABCG1P45844 678 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 RPL34P49207 117 aaKnown RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 SARNPP82979 210 aaKnown RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 PPIDQ08752 370 aaKnown RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 FAAP100Q0VG06 881 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 DGKZQ13574 1117 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 FBXO43Q4G163 708 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 ZRANB3Q5FWF4 1079 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 XKR4Q5GH76 650 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 DCAF17Q5H9S7 520 aaPredicted RBP4.09□□□□□ -1.75
MCF2-203ENST00000370576 OLFML2BQ68BL8 750 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 ARMCX5Q6P1M9 558 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 WDR93Q6P2C0 686 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 TRIM65Q6PJ69 517 aa4.09□□□□□ -1.75
MCF2-203ENST00000370576 MAEAQ7L5Y9 396 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms