RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 KLC4Q9NSK0 619 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 TRMT13Q9NUP7 481 aaKnown RBP4.54□□□□□ -1.68
XCL1-201ENST00000367818 CPSF2Q9P2I0 782 aaKnown RBP4.54□□□□□ -1.68
XCL1-201ENST00000367818 MYO1AQ9UBC5 1043 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 GGA2Q9UJY4 613 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 STXBP5LQ9Y2K9 1186 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 CHST2Q9Y4C5 530 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 GRIN2DO15399 1336 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 LCTP09848 1927 aa4.54□□□□□ -1.68
XCL1-201ENST00000367818 TARSL2A2RTX5 802 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 WDR91A4D1P6 747 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 GOLGA6CA6NDK9 693 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 UNC119BA6NIH7 251 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 LRRC3CA6NJW4 275 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ASB14A6NK59 587 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 IPO7O95373 1038 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 SYF2O95926 243 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 TIMP1P01033 207 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ICAM1P05362 532 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 GOLGA6DP0CG33 693 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PDHBP11177 359 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 MYCLP12524 364 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 FOSL2P15408 326 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 RPS6KB1P23443 525 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 HOXA13P31271 388 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 MPLP40238 635 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PRPHP41219 470 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ME1P48163 572 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 FNTAP49354 379 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 CDK7P50613 346 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ALDH5A1P51649 535 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 OAZ1P54368 228 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ANTXR2P58335 489 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 RPS6P62753 249 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 VSNL1P62760 191 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 MYL5Q02045 173 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ALDH6A1Q02252 535 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 ZNF543Q08ER8 600 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 IFRD2Q12894 506 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 SLMAPQ14BN4 828 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ALX1Q15699 326 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 SNCBQ16143 134 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PDCD2Q16342 344 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 CDC37Q16543 378 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 LY6KQ17RY6 165 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 TKFCQ3LXA3 575 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 FILIP1LQ4L180 1135 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 CREB3L3Q68CJ9 461 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 CYB5R4Q7L1T6 521 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ADGRF4Q8IZF3 695 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 TMEM199Q8N511 208 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 IGSF22Q8N9C0 903 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PCSK9Q8NBP7 692 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 MAFAQ8NHW3 353 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 PCDH19Q8TAB3 1148 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ASB10Q8WXI3 467 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 RUBCNQ92622 972 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ESR2Q92731 530 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 WDR24Q96S15 920 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PNKPQ96T60 521 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 NAPGQ99747 312 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 CPPED1Q9BRF8 314 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 CPEB1Q9BZB8 566 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 UPF3AQ9H1J1 476 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 RANBP17Q9H2T7 1088 aaKnown RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 HIPK3Q9H422 1215 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PLEKHA4Q9H4M7 779 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 PRDM12Q9H4Q4 367 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 KAT14Q9H8E8 782 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ATP6V0A4Q9HBG4 840 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 GOLGA6AQ9NYA3 693 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 COL20A1Q9P218 1284 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 ANAPC4Q9UJX5 808 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 HPCAL4Q9UM19 191 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 WDR3Q9UNX4 943 aaKnown RBP eCLIP4.53□□□□□ -1.68
XCL1-201ENST00000367818 TRAF6Q9Y4K3 522 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 MYH7BA7E2Y1 1941 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 MYH6P13533 1939 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 TRIP12Q14669 1992 aaPredicted RBP4.53□□□□□ -1.68
XCL1-201ENST00000367818 PLIN4Q96Q06 1357 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 SCN5AQ14524 2016 aa4.53□□□□□ -1.68
XCL1-201ENST00000367818 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 SRRM3A6NNA2 597 aaPredicted RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 LRRIQ3A6PVS8 624 aaPredicted RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 CYSRT1A8MQ03 144 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 SCDO00767 359 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 NDUFAB1O14561 156 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 ZEB2O60315 1214 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 PFKFB2O60825 505 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 CDKL5O76039 1030 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 ARIH2O95376 493 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 CFBP00751 764 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 FGBP02675 491 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 PARP1P09874 1014 aaKnown RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 RHOXF2BP0C7M4 288 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 TXNP10599 105 aaKnown RBP4.53□□□□□ -1.69
XCL1-201ENST00000367818 CPA1P15085 419 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 PAX7P23759 505 aa4.53□□□□□ -1.69
XCL1-201ENST00000367818 GCKP35557 465 aa4.53□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms