RNA–Protein interactions for RNA: ENST00000366442.2

SHC1-201, Transcript of SHC adaptor protein 1, humanhuman

TSL 3

Gene SHC1, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-201ENST00000366442 LAMA1P25391 3075 aa24.61■■□□□ 1.53
SHC1-201ENST00000366442 NUP205Q92621 2012 aa24.61■■□□□ 1.53
SHC1-201ENST00000366442 CAVIN2O95810 425 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 SLC11A2P49281 568 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 APBA1Q02410 837 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 ENPP2Q13822 863 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 VWA3BQ502W6 1294 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 KIAA1211LQ6NV74 962 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 LPCAT2Q7L5N7 544 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 TMA16Q96EY4 203 aaKnown RBP24.6■■□□□ 1.53
SHC1-201ENST00000366442 SERPINB11Q96P15 392 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 NDST4Q9H3R1 872 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 SIX2Q9NPC8 291 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 ACP6Q9NPH0 428 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 CALCOCO1Q9P1Z2 691 aa24.6■■□□□ 1.53
SHC1-201ENST00000366442 MBD1Q9UIS9 605 aaPredicted RBP24.6■■□□□ 1.53
SHC1-201ENST00000366442 IRAK2O43187 625 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 TIMM44O43615 452 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 USP8P40818 1118 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 TBX4P57082 545 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 MPP7Q5T2T1 576 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 DQX1Q8TE96 717 aaKnown RBP24.59■■□□□ 1.53
SHC1-201ENST00000366442 FAM149B1Q96BN6 582 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 TUBGCP2Q9BSJ2 902 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 ELOVL2Q9NXB9 296 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 CYTH4Q9UIA0 394 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 TLR6Q9Y2C9 796 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 STON1Q9Y6Q2 735 aa24.59■■□□□ 1.53
SHC1-201ENST00000366442 E5RJQ4 531 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 PAPSS1O43252 624 aaPredicted RBP24.58■■□□□ 1.53
SHC1-201ENST00000366442 MAP3K13O43283 966 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 ZNF217O75362 1048 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 NDUFV2P19404 249 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 PDCLQ13371 301 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 MIIPQ5JXC2 388 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 RNF43Q68DV7 783 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 CYP2U1Q7Z449 544 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 SMOC1Q9H4F8 434 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 PCDHGC3Q9UN70 934 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 NAALADL1Q9UQQ1 740 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 RAD54BQ9Y620 910 aa24.58■■□□□ 1.53
SHC1-201ENST00000366442 NCOR2Q9Y618 2525 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 WASH3PC4AMC7 463 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 ACSL4O60488 711 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 TSPAN3O60637 253 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 DHPSP49366 369 aaPredicted RBP24.57■■□□□ 1.52
SHC1-201ENST00000366442 PTK2Q05397 1052 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 STARD3Q14849 445 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 PIK3R6Q5UE93 754 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 SLC36A4Q6YBV0 504 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 FRMD1Q8N878 549 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 WFIKKN2Q8TEU8 576 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 SLC39A13Q96H72 371 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 FCRL2Q96LA5 508 aaPredicted RBP24.57■■□□□ 1.52
SHC1-201ENST00000366442 GBP4Q96PP9 640 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 LHX5Q9H2C1 402 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 RXFP3Q9NSD7 469 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 DNAJC12Q9UKB3 198 aa24.57■■□□□ 1.52
SHC1-201ENST00000366442 DCDC2BA2VCK2 349 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 HLA-FP30511 346 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 DPP6P42658 865 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 IL12RB1P42701 662 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 FAM133BQ5BKY9 247 aaKnown RBP24.56■■□□□ 1.52
SHC1-201ENST00000366442 TMEM215Q68D42 235 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 DPY19L2P1Q6NXN4 242 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.56■■□□□ 1.52
SHC1-201ENST00000366442 ZNF557Q8N988 423 aaPredicted RBP24.56■■□□□ 1.52
SHC1-201ENST00000366442 MRGPRX1Q96LB2 322 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 DDX50Q9BQ39 737 aaKnown RBP24.56■■□□□ 1.52
SHC1-201ENST00000366442 POPDC2Q9HBU9 364 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 AJAP1Q9UKB5 411 aaPredicted RBP24.56■■□□□ 1.52
SHC1-201ENST00000366442 SPTBN2O15020 2390 aa24.56■■□□□ 1.52
SHC1-201ENST00000366442 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 MED19A0JLT2 244 aaPredicted RBP24.55■■□□□ 1.52
SHC1-201ENST00000366442 KCNJ18B7U540 433 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 CAPN9O14815 690 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 AP5Z1O43299 807 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 YWHAZP63104 245 aaKnown RBP24.55■■□□□ 1.52
SHC1-201ENST00000366442 KCNJ12Q14500 433 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 ZNF234Q14588 700 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 SYPL2Q5VXT5 272 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 TCEAL6Q6IPX3 200 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 KIAA0907Q7Z7F0 614 aaPredicted RBP24.55■■□□□ 1.52
SHC1-201ENST00000366442 TAC4Q86UU9 113 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 TMEFF1Q8IYR6 380 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 DDX1Q92499 740 aaKnown RBP24.55■■□□□ 1.52
SHC1-201ENST00000366442 TCEAL3Q969E4 200 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 CIPCQ9C0C6 399 aa24.55■■□□□ 1.52
SHC1-201ENST00000366442 TNRC6BQ9UPQ9 1833 aaKnown RBP24.54■■□□□ 1.52
SHC1-201ENST00000366442 IGHV1OR15-9A0A0B4J2B8 117 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 GLI1P08151 1106 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 EEF1GP26641 437 aaKnown RBP24.54■■□□□ 1.52
SHC1-201ENST00000366442 SLC6A4P31645 630 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 CLCN1P35523 988 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 SGSHP51688 502 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 HSP90AA4PQ58FG1 418 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 TCP11X2Q5H9J9 407 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 RFWD3Q6PCD5 774 aa24.54■■□□□ 1.52
SHC1-201ENST00000366442 RBM43Q6ZSC3 357 aaKnown RBP24.54■■□□□ 1.52
SHC1-201ENST00000366442 METTL3Q86U44 580 aaKnown RBP24.54■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms