RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 HTR3DQ70Z44 454 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM131BQ86XD5 332 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 DDX42Q86XP3 938 aaKnown RBP eCLIP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 UNC45BQ8IWX7 931 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 SYCE1Q8N0S2 351 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 C17orf53Q8N3J3 647 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 CELF5Q8N6W0 485 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 KIAA1958Q8N8K9 716 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 SH3RF2Q8TEC5 729 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 UBE2Q2Q8WVN8 375 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 AZIN2Q96A70 460 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 NTAN1Q96AB6 310 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 GOLPH3Q9H4A6 298 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 KIF9Q9HAQ2 790 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 ANLNQ9NQW6 1124 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 OBP2AQ9NY56 170 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 USP18Q9UMW8 372 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 I6L893 689 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 TCF4P15884 667 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 FCARP24071 287 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 IL1R2P27930 398 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 PLA2G5P39877 138 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 AIF1P55008 147 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 TAS2R40P59535 323 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 SLC25A11Q02978 314 aaKnown RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 MTA1Q13330 715 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 ZNF77Q15935 545 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 BOLA3Q53S33 107 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 SCYL2Q6P3W7 929 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 CYP4V2Q6ZWL3 525 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 NT5DC3Q86UY8 548 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 GJD3Q8N144 294 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 TRIM58Q8NG06 486 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 RIN3Q8TB24 985 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 CD101Q93033 1021 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 RNF34Q969K3 372 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 E2F7Q96AV8 911 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 ACSF2Q96CM8 615 aaPredicted RBP12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 RSPRY1Q96DX4 576 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 LRRC3BQ96PB8 259 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 PEBP4Q96S96 227 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 DCLK3Q9C098 648 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 TKTL2Q9H0I9 626 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 C11orf16Q9NQ32 467 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 CFAP97Q9P2B7 532 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 PCSK1NQ9UHG2 260 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 SLC12A6Q9UHW9 1150 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM50BQ9Y247 325 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
NIF3L1-201ENST00000359683 NUP210Q8TEM1 1887 aaPredicted RBP12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 E2F8A0AVK6 867 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 PRPSAP2O60256 369 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 APOEP02649 317 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 VIPR2P41587 438 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 HARS2P49590 506 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 SCAPQ12770 1279 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 USP4Q13107 963 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 HADHQ16836 314 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ARL13BQ3SXY8 428 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 LRRC38Q5VT99 294 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 TXNRD3NBQ6F5E7 133 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 TANGO2Q6ICL3 276 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 Q6ZNB5 142 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 PSTKQ8IV42 348 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 CCDC185Q8N715 623 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ATP6V0D2Q8N8Y2 350 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 BTN2A3PQ96KV6 586 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ALS2CR12Q96Q35 445 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 HAPLN3Q96S86 360 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ZFP14Q9HCL3 533 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 STOML2Q9UJZ1 356 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 AMFRQ9UKV5 643 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 FZD10Q9ULW2 581 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ZNF510Q9Y2H8 683 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 HCN4Q9Y3Q4 1203 aa12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 HELZP42694 1942 aaKnown RBP12.87□□□□□ -0.35
NIF3L1-201ENST00000359683 ANHXE9PGG2 379 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 SPOPO43791 374 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 KIF5CO60282 957 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 LATS1O95835 1130 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 IRF1P10914 325 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 CORO1AP31146 461 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 ERMARDQ5T6L9 678 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 PEX26Q7Z412 305 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 POLNQ7Z5Q5 900 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 ZSCAN30Q86W11 494 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 ZDHHC14Q8IZN3 488 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 TEKT4Q8WW24 435 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 ELSPBP1Q96BH3 223 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 FAM122AQ96E09 287 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 C1orf74Q96LT6 269 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 OSBPL2Q9H1P3 480 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 TMPRSS4Q9NRS4 437 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 XPO7Q9UIA9 1087 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 SH3BP1Q9Y3L3 701 aa12.86□□□□□ -0.35
NIF3L1-201ENST00000359683 NR2E1Q9Y466 385 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms