RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CA9Q16790 459 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 MGAT5BQ3V5L5 792 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RAB6CQ53S08 254 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ZDHHC24Q6UX98 284 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 LRIG3Q6UXM1 1119 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 CROCCP2Q86T23 111 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 TADA2BQ86TJ2 420 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 CDKL3Q8IVW4 592 aaPredicted RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 GSPT2Q8IYD1 628 aaKnown RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PQLC3Q8N755 202 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 COLGALT1Q8NBJ5 622 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ATAD1Q8NBU5 361 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PDZD8Q8NEN9 1154 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 SCAMP5Q8TAC9 235 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ZNF461Q8TAF7 563 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 FBXO25Q8TCJ0 367 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 DQX1Q8TE96 717 aaKnown RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RIN2Q8WYP3 895 aaPredicted RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RTP4Q96DX8 246 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 KCTD15Q96SI1 283 aaPredicted RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RUFY1Q96T51 708 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 EPAS1Q99814 870 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 TTLL2Q9BWV7 592 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ADAM33Q9BZ11 813 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PHACTR1Q9C0D0 580 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 RAB6CQ9H0N0 254 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PLEKHA4Q9H4M7 779 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ARHGEF38Q9NXL2 777 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 DONSONQ9NYP3 566 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 CWC15Q9P013 229 aaKnown RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 FNIP2Q9P278 1114 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 ANAPC5Q9UJX4 755 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 CDY1Q9Y6F8 540 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 MRPL42Q9Y6G3 142 aaKnown RBP13.98□□□□□ -0.17
CCDC197-201ENST00000359253 VWA8A3KMH1 1905 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 PTPRSQ13332 1948 aa13.98□□□□□ -0.17
CCDC197-201ENST00000359253 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 GOLGA6BA6NDN3 693 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 DNALI1O14645 258 aaPredicted RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 IRAK2O43187 625 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 ABLIM3O94929 683 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 URODP06132 367 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 FAM153BP0C7A2 387 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 RARGP13631 454 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 PPP3CCP48454 512 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 ATXN1P54253 815 aaKnown RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 NRG1Q02297 640 aaPredicted RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 UBE3AQ05086 875 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 SEMA3BQ13214 749 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 GRIN2CQ14957 1233 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 MORF4L2Q15014 288 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 PAFAH1B3Q15102 231 aaKnown RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 DDR2Q16832 855 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 FAM153CQ494X1 144 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 DARS2Q6PI48 645 aaKnown RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 RHBDF2Q6PJF5 856 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 RNF19BQ6ZMZ0 732 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 TAS1R1Q7RTX1 841 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 TMC3Q7Z5M5 1100 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 SCD5Q86SK9 330 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 TMEM173Q86WV6 379 aaPredicted RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 RELL1Q8IUW5 271 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 IQCKQ8N0W5 287 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 BCL7CQ8WUZ0 217 aaPredicted RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 EDEM1Q92611 657 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 LMAN2LQ9H0V9 348 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 GPATCH2LQ9NWQ4 482 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 CALCOCO1Q9P1Z2 691 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 FAM153AQ9UHL3 310 aa13.97□□□□□ -0.17
CCDC197-201ENST00000359253 TPX2Q9ULW0 747 aaKnown RBP13.97□□□□□ -0.17
CCDC197-201ENST00000359253 WDR27A2RRH5 827 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 H7C0C1 242 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 EEF2KO00418 725 aaKnown RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 OR1D2P34982 312 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 SERPINB6P35237 376 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 ATP5OP48047 213 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 EIF3BP55884 814 aaKnown RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 ARPP19P56211 112 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 DHX9Q08211 1270 aaKnown RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 DUSP4Q13115 394 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 RAB33AQ14088 237 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 PDK1Q15118 436 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 P3H1Q32P28 736 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 SNX30Q5VWJ9 437 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 HIBCHQ6NVY1 386 aaPredicted RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 TRMT10CQ7L0Y3 403 aaKnown RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 TAC4Q86UU9 113 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 HOOK3Q86VS8 718 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 ARNTL2Q8WYA1 636 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 RNF34Q969K3 372 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 FBXO32Q969P5 355 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 C1orf74Q96LT6 269 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 PGLYRP2Q96PD5 576 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 GAS2L1Q99501 681 aaPredicted RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 CDX2Q99626 313 aaPredicted RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 SEPT5Q99719 369 aaPredicted RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 C17orf80Q9BSJ5 609 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 TMEM121Q9BTD3 319 aa13.96□□□□□ -0.17
CCDC197-201ENST00000359253 FRMD8Q9BZ67 464 aaPredicted RBP13.96□□□□□ -0.17
CCDC197-201ENST00000359253 TXLNGYQ9BZA5 131 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms