RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 TRIP4Q15650 581 aaPredicted RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 HECTD3Q5T447 861 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 SLC9A4Q6AI14 798 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 DRICH1Q6PGQ1 229 aaPredicted RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 PQLC3Q8N755 202 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 HAPLN3Q96S86 360 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 FRMD8P1Q9BZ68 369 aaPredicted RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 SAE1Q9UBE0 346 aaPredicted RBP16.16■□□□□ 0.18
CTSA-202ENST00000354880 OR12D3Q9UGF7 316 aa16.16■□□□□ 0.18
CTSA-202ENST00000354880 FAM72CH0Y354 149 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 EEF2KO00418 725 aaKnown RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 APOL1O14791 398 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 LIASO43766 372 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ZFXP17010 805 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 TUBP50607 506 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ZNF135P52742 658 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 OTUD4Q01804 1114 aaKnown RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 FAM72AQ5TYM5 149 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 FAM72DQ6L9T8 149 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 KLHDC10Q6PID8 442 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 RTL10Q7L3V2 364 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 FAM72BQ86X60 149 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 PLD5Q8N7P1 536 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ATL2Q8NHH9 583 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ACTL9Q8TC94 416 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 RUBCNQ92622 972 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 FCRL2Q96LA5 508 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 EPAS1Q99814 870 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 NACA2Q9H009 215 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 OSBPL2Q9H1P3 480 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 SLC28A3Q9HAS3 691 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ZNF334Q9HCZ1 680 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 FEZ2Q9UHY8 353 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 DNMT3LQ9UJW3 386 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 DNPEPQ9ULA0 475 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 SLC12A8A0AV02 714 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 FAM187AA6NFU0 413 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 KCNU1A8MYU2 1149 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 CLASP2O75122 1294 aaKnown RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 TGM2P21980 687 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 BMP8BP34820 402 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 PTGIRP43119 386 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 KPNA1P52294 538 aaPredicted RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 BYSLQ13895 437 aaKnown RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 PABPC1LQ4VXU2 614 aaKnown RBP16.15■□□□□ 0.18
CTSA-202ENST00000354880 PPM1LQ5SGD2 360 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 WDR93Q6P2C0 686 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 JAMLQ86YT9 394 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 GRK7Q8WTQ7 553 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ARNTL2Q8WYA1 636 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 P3H4Q92791 437 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 SLCO2A1Q92959 643 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 HINFPQ9BQA5 517 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 PRDM16Q9HAZ2 1276 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ARHGEF4Q9NR80 690 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 RAB21Q9UL25 225 aa16.15■□□□□ 0.18
CTSA-202ENST00000354880 ANAPC1Q9H1A4 1944 aa16.14■□□□□ 0.18
CTSA-202ENST00000354880 COCHO43405 550 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 PAGE1O75459 146 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 ZMYND10O75800 440 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 ECEL1O95672 775 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 MOCS2O96007 188 aaPredicted RBP16.14■□□□□ 0.17
CTSA-202ENST00000354880 APOEP02649 317 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 F11P03951 625 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 PECAM1P16284 738 aaPredicted RBP16.14■□□□□ 0.17
CTSA-202ENST00000354880 AMPD1P23109 780 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 MCM3P25205 808 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 HCAR3P49019 387 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 TPI1P60174 286 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 VSNL1P62760 191 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 GUCY2DQ02846 1103 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 RING1Q06587 406 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 RFX8Q6ZV50 586 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 TMEM150AQ86TG1 271 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 SLC35B2Q8TB61 432 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 NKD2Q969F2 451 aaPredicted RBP16.14■□□□□ 0.17
CTSA-202ENST00000354880 CCDC114Q96M63 670 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 SIK2Q9H0K1 926 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 IL21Q9HBE4 155 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 MAN1C1Q9NR34 630 aa16.14■□□□□ 0.17
CTSA-202ENST00000354880 UTP11Q9Y3A2 253 aaKnown RBP16.14■□□□□ 0.17
CTSA-202ENST00000354880 HBS1LQ9Y450 684 aaKnown RBP16.14■□□□□ 0.17
CTSA-202ENST00000354880 ZSCAN5CA6NGD5 496 aaPredicted RBP16.13■□□□□ 0.17
CTSA-202ENST00000354880 DAPK3O43293 454 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 LRIG2O94898 1065 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 OAS1P00973 400 aaKnown RBP16.13■□□□□ 0.17
CTSA-202ENST00000354880 IGLV3-27P01718 113 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 EPCAMP16422 314 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 GGCXP38435 758 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 VCPP55072 806 aaKnown RBP16.13■□□□□ 0.17
CTSA-202ENST00000354880 LMNB2Q03252 620 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 DPYSQ14117 519 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 NOMO1Q15155 1222 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 OASLQ15646 514 aaKnown RBP16.13■□□□□ 0.17
CTSA-202ENST00000354880 C1orf228Q6PIY5 440 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 NPNTQ6UXI9 565 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 TDHQ8IZJ6 230 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 SLC22A17Q8WUG5 538 aa16.13■□□□□ 0.17
CTSA-202ENST00000354880 EPB41L5Q9HCM4 733 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms