RNA–Protein interactions for RNA: ENST00000353909.7

MBD1-205, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-205ENST00000353909 XRCC4Q13426 336 aa16.08■□□□□ 0.16
MBD1-205ENST00000353909 LVRNQ6Q4G3 990 aa16.08■□□□□ 0.16
MBD1-205ENST00000353909 BHLHA9Q7RTU4 235 aa16.08■□□□□ 0.16
MBD1-205ENST00000353909 TFB1MQ8WVM0 346 aaKnown RBP16.08■□□□□ 0.16
MBD1-205ENST00000353909 FETUBQ9UGM5 382 aa16.08■□□□□ 0.16
MBD1-205ENST00000353909 BDNFP23560 247 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 MAGEA6P43360 314 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 MGAT5Q09328 741 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 AP1B1Q10567 949 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 FAM133BQ5BKY9 247 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 ANKRD20A2Q5SQ80 823 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 ANKRD20A1Q5TYW2 823 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 ANKRD20A3Q5VUR7 823 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 CCSAPQ6IQ19 270 aaPredicted RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 TRPM8Q7Z2W7 1104 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 MRPL10Q7Z7H8 261 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 LRRTM3Q86VH5 581 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 CTAGE3PQ8IX95 158 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 UNC5BQ8IZJ1 945 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 PPM1NQ8N819 430 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 TCP10LQ8TDR4 215 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SLC44A1Q8WWI5 657 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 MYLPFQ96A32 169 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SIGLEC10Q96LC7 697 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 RMDN2Q96LZ7 410 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 PGLYRP2Q96PD5 576 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 ALG13Q9NP73 1137 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 STAP1Q9ULZ2 295 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 MAD1L1Q9Y6D9 718 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 B4GALT3O60512 393 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 ATP2A2P16615 1042 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 ZFXP17010 805 aaPredicted RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 OLIG2Q13516 323 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SMAD1Q15797 465 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 UNC5AQ6ZN44 842 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SPATA21Q7Z572 469 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 HACE1Q8IYU2 909 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 TMEM86AQ8N2M4 240 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 OR10T2Q8NGX3 314 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 P2RY11Q96G91 374 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 PITPNM3Q9BZ71 974 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 DNAI2Q9GZS0 605 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 PRDM12Q9H4Q4 367 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SENP1Q9P0U3 644 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SEPT10Q9P0V9 454 aa16.07■□□□□ 0.16
MBD1-205ENST00000353909 SMG5Q9UPR3 1016 aaKnown RBP16.07■□□□□ 0.16
MBD1-205ENST00000353909 TDRD15B5MCY1 1934 aaKnown RBP16.06■□□□□ 0.16
MBD1-205ENST00000353909 A0A0U1RQF3 1178 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 H0YHG0 523 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 ADRA1BP35368 520 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 MAGEA3P43357 314 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 SPARCL1Q14515 664 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 RAB41Q5JT25 222 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 BANPQ8N9N5 519 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 CCNYQ8ND76 341 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 KLHDC9Q8NEP7 349 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 DDIT4Q9NX09 232 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 MRPL42Q9Y6G3 142 aaKnown RBP16.06■□□□□ 0.16
MBD1-205ENST00000353909 KCNK1O00180 336 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 CPP00450 1065 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 RFX8Q6ZV50 586 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 PDCD7Q8N8D1 485 aaKnown RBP16.06■□□□□ 0.16
MBD1-205ENST00000353909 KDM4CQ9H3R0 1056 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 PPCSQ9HAB8 311 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 CDH9Q9ULB4 789 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 BPTFQ12830 3046 aa16.06■□□□□ 0.16
MBD1-205ENST00000353909 RNF103O00237 685 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 EEF2KO00418 725 aaKnown RBP16.05■□□□□ 0.16
MBD1-205ENST00000353909 DPYSQ14117 519 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 DSC3Q14574 896 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 MTFR1Q15390 333 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 LACTB2Q53H82 288 aaPredicted RBP16.05■□□□□ 0.16
MBD1-205ENST00000353909 SCAMP5Q8TAC9 235 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 DEPDC1BQ8WUY9 529 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.05■□□□□ 0.16
MBD1-205ENST00000353909 PRKAG3Q9UGI9 489 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 ZNF623O75123 536 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 LTFP02788 710 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 INHBAP08476 426 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 RPAINQ86UA6 219 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 ZNF276Q8N554 614 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 NPWQ8N729 165 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 CCDC63Q8NA47 563 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 COLGALT1Q8NBJ5 622 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 CNGB3Q9NQW8 809 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 SLC17A6Q9P2U8 582 aa16.05■□□□□ 0.16
MBD1-205ENST00000353909 A0A0A0MRY4 1105 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 H3BRJ5 948 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 UBOX5O94941 541 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 FAM163BP0C2L3 166 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 CSH1P0DML2 217 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 CSH2P0DML3 217 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 PYGBP11216 843 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 ERCC2P18074 760 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 RPL9P32969 192 aaKnown RBP16.04■□□□□ 0.16
MBD1-205ENST00000353909 PGFP49763 221 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 SLC18A1P54219 525 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 WASHC5Q12768 1159 aa16.04■□□□□ 0.16
MBD1-205ENST00000353909 IFRD2Q12894 506 aaPredicted RBP16.04■□□□□ 0.16
MBD1-205ENST00000353909 SEMA5AQ13591 1074 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms