RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 GABBR1Q9UBS5 961 aa15.4■□□□□ 0.06
TRAF3-202ENST00000351691 PCDHGB4Q9UN71 923 aa15.4■□□□□ 0.06
TRAF3-202ENST00000351691 PCDHGB5Q9Y5G0 923 aa15.4■□□□□ 0.06
TRAF3-202ENST00000351691 PARP14Q460N5 1801 aa15.4■□□□□ 0.06
TRAF3-202ENST00000351691 F8VP50 259 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 EXTL3O43909 919 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 LSM8O95777 96 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 KRT7P08729 469 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 RBP3P10745 1247 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 THRAP10827 490 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 COX4I1P13073 169 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 ZNF12P17014 697 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 RPS12P25398 132 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PHKA2P46019 1235 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 BASP1P80723 227 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PFKPQ01813 784 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 RELAQ04206 551 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 BAATQ14032 418 aaPredicted RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 FASTKD1Q53R41 847 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 LPCAT2Q7L5N7 544 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 HIPK4Q8NE63 616 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PPP1R14CQ8TAE6 165 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 ACMSDQ8TDX5 336 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 SGF29Q96ES7 293 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 NUF2Q9BZD4 464 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 SLC13A1Q9BZW2 595 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 BRD8Q9H0E9 1235 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CYP4F11Q9HBI6 524 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 AS3MTQ9HBK9 375 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 AGTPBP1Q9UPW5 1226 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 BOLA2-SMG1P6H3BVE0 249 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CST8O60676 142 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CFHP08603 1231 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CCDC130P13994 396 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 KCNA2P16389 499 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 GRK2P25098 689 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PPARGP37231 505 aaPredicted RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 SLC1A6P48664 564 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CNTN2Q02246 1040 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 MTMR2Q13614 643 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PSMD6Q15008 389 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 METTL21CQ5VZV1 264 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 TXNRD3NBQ6F5E7 133 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 DNAJC24Q6P3W2 148 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 FRMD7Q6ZUT3 714 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CHERPQ8IWX8 916 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CTAGE3PQ8IX95 158 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 NDUFAF2Q8N183 169 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 NSUN6Q8TEA1 469 aaKnown RBP15.39■□□□□ 0.05
TRAF3-202ENST00000351691 CORO1BQ9BR76 489 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 SH2D3AQ9BRG2 576 aa15.39■□□□□ 0.05
TRAF3-202ENST00000351691 PRSS51A0A1B0GVH4 220 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 TMEM247A6NEH6 219 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 APOC4-APOC2K7ER74 178 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 BMP10O95393 424 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 GSRP00390 522 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 APOC2P02655 101 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 SERPINE1P05121 402 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 FGF3P11487 239 aaPredicted RBP15.38■□□□□ 0.05
TRAF3-202ENST00000351691 ZNF24P17028 368 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 PSMC3P17980 439 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 GJA8P48165 433 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 CUL2Q13617 745 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 SMYD5Q6GMV2 418 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 C16orf89Q6UX73 402 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 TRIML2Q8N7C3 387 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 PPP4R1Q8TF05 950 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 ABHD8Q96I13 439 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 TRIM56Q9BRZ2 755 aaKnown RBP15.38■□□□□ 0.05
TRAF3-202ENST00000351691 IFT122Q9HBG6 1241 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 TBC1D23Q9NUY8 699 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 ARHGAP28Q9P2N2 729 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 CDH7Q9ULB5 785 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 PCDHB4Q9Y5E5 795 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 STYXL1Q9Y6J8 313 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 DOCK1Q14185 1865 aa15.38■□□□□ 0.05
TRAF3-202ENST00000351691 CCDC162PA2VCL2 907 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 TRIM43BA6NCK2 446 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 ZNF195O14628 629 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 TBXAS1P24557 533 aaPredicted RBP15.37■□□□□ 0.05
TRAF3-202ENST00000351691 OGDHQ02218 1023 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 DPYSQ14117 519 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 ZACNQ401N2 412 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 DCAF15Q66K64 600 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 AMIGO2Q86SJ2 522 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 REPS2Q8NFH8 660 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 HM13Q8TCT9 377 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 GIPC3Q8TF64 312 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 KBTBD7Q8WVZ9 684 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 NLRP7Q8WX94 980 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 C12orf42Q96LP6 360 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 MCEEQ96PE7 176 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 ZNF518BQ9C0D4 1074 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 POPDC2Q9HBU9 364 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 TDRKHQ9Y2W6 561 aaKnown RBP15.37■□□□□ 0.05
TRAF3-202ENST00000351691 RBM47A0AV96 593 aaKnown RBP15.37■□□□□ 0.05
TRAF3-202ENST00000351691 CXorf49A8MYA2 514 aaPredicted RBP15.37■□□□□ 0.05
TRAF3-202ENST00000351691 GPR25O00155 361 aa15.37■□□□□ 0.05
TRAF3-202ENST00000351691 HNRNPDLO14979 420 aaKnown RBP15.37■□□□□ 0.05
TRAF3-202ENST00000351691 CLASP2O75122 1294 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms