RNA–Protein interactions for RNA: ENST00000349893.8

COPE-202, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 2 BASIC

Gene COPE, Length 948 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-202ENST00000349893 CNNM4Q6P4Q7 775 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 FBXL19Q6PCT2 694 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 C12orf29Q8N999 325 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 PLEKHO2Q8TD55 490 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 TSC1Q92574 1164 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 BTBD1Q9H0C5 482 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 TNMDQ9H2S6 317 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 KBTBD4Q9NVX7 518 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 AGO1Q9UL18 857 aaKnown RBP16.49■□□□□ 0.23
COPE-202ENST00000349893 USP3Q9Y6I4 520 aa16.49■□□□□ 0.23
COPE-202ENST00000349893 PLXNA2O75051 1894 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 C10orf142B7Z368 130 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 CLIC2O15247 247 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 PHACTR2O75167 634 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 VNN1O95497 513 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 C4BPAP04003 597 aaKnown RBP16.48■□□□□ 0.23
COPE-202ENST00000349893 IGHV4-34P06331 123 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 CYP2J2P51589 502 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 BCAT1P54687 386 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 IL9RQ01113 521 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 CFHR1Q03591 330 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 TLE3Q04726 772 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 EHHADHQ08426 723 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 TARDBPQ13148 414 aaKnown RBP eCLIP16.48■□□□□ 0.23
COPE-202ENST00000349893 SCARA5Q6ZMJ2 495 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 SAP25Q8TEE9 199 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 CIPCQ9C0C6 399 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 SGK2Q9HBY8 427 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 FAM49BQ9NUQ9 324 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 CGNQ9P2M7 1197 aaKnown RBP16.48■□□□□ 0.23
COPE-202ENST00000349893 NAGPAQ9UK23 515 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 SMC3Q9UQE7 1217 aa16.48■□□□□ 0.23
COPE-202ENST00000349893 ERVH48-1M5A8F1 160 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 CD2BP2O95400 341 aaKnown RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 LDOC1O95751 146 aaPredicted RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 CYBBP04839 570 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 CORO1AP31146 461 aaKnown RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 CASP4P49662 377 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 CLDN6P56747 220 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 RPS14P62263 151 aaKnown RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 SHBQ15464 509 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 HES3Q5TGS1 186 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 KIAA0907Q7Z7F0 614 aaPredicted RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 PARD3BQ8TEW8 1205 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 RFFLQ8WZ73 363 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 FGF11Q92914 225 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 WBP1Q96G27 269 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 CNDP2Q96KP4 475 aaKnown RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 ELF4Q99607 663 aaPredicted RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 ACE2Q9BYF1 805 aaPredicted RBP16.47■□□□□ 0.23
COPE-202ENST00000349893 PANK2Q9BZ23 570 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 LRRC27Q9C0I9 530 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 AK5Q9Y6K8 562 aa16.47■□□□□ 0.23
COPE-202ENST00000349893 A0A1W2PPC4 97 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 LRRIQ3A6PVS8 624 aaPredicted RBP16.46■□□□□ 0.23
COPE-202ENST00000349893 YKT6O15498 198 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 FSBPO95073 299 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 RALAP11233 206 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 P4HA1P13674 534 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ADORA2BP29275 332 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ASPAP45381 313 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 INCA1Q0VD86 236 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 DNAJC3Q13217 504 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ILKQ13418 452 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 BIRC3Q13489 604 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 E2F4Q16254 413 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 SGSM1Q2NKQ1 1148 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 FAM26FQ5R3K3 315 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ADAT2Q7Z6V5 191 aaKnown RBP16.46■□□□□ 0.23
COPE-202ENST00000349893 ERICH1Q86X53 443 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 GATAD2AQ86YP4 633 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.46■□□□□ 0.23
COPE-202ENST00000349893 WFIKKN2Q8TEU8 576 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 TAF4BQ92750 862 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ELMO3Q96BJ8 720 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 PRSS16Q9NQE7 514 aa16.46■□□□□ 0.23
COPE-202ENST00000349893 ARID1BQ8NFD5 2236 aaPredicted RBP16.46■□□□□ 0.23
COPE-202ENST00000349893 CBX4O00257 560 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 STX6O43752 255 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 RPN1P04843 607 aaKnown RBP16.45■□□□□ 0.22
COPE-202ENST00000349893 HOXD9P28356 352 aaPredicted RBP16.45■□□□□ 0.22
COPE-202ENST00000349893 HLA-FP30511 346 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 C21orf59P57076 290 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 ARID5AQ03989 594 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 TTC31Q49AM3 519 aaPredicted RBP16.45■□□□□ 0.22
COPE-202ENST00000349893 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 USP30Q70CQ3 517 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 ADIPOR2Q86V24 386 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 DENND1CQ8IV53 801 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 SPACA3Q8IXA5 215 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 DDI1Q8WTU0 396 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 TMEM174Q8WUU8 243 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 TMEM176AQ96HP8 235 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 TWNKQ96RR1 684 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 CUEDC2Q9H467 287 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 RASAL2Q9UJF2 1139 aa16.45■□□□□ 0.22
COPE-202ENST00000349893 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.45■□□□□ 0.22
COPE-202ENST00000349893 BRINP1O60477 761 aa16.44■□□□□ 0.22
COPE-202ENST00000349893 ASS1P00966 412 aaKnown RBP16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms