RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 TSG101Q99816 390 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 C7orf25Q9BPX7 421 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 TUBB6Q9BUF5 446 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 NAPBQ9H115 298 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 TAOK3Q9H2K8 898 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 METTL14Q9HCE5 456 aaKnown RBP8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 ACSS2Q9NR19 701 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 SUCLA2Q9P2R7 463 aaPredicted RBP8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 ITGB1BP2Q9UKP3 347 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 SPO11Q9Y5K1 396 aa8.09□□□□□ -1.11
UBE2D3-204ENST00000349311 A0A0A6YYK5 440 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 PRAMEF25A6NGN4 478 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 H0YIN7 160 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 LAD1O00515 517 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 RASGRF2O14827 1237 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 MAPK13O15264 365 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 MAFGO15525 162 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 ATP9AO75110 1047 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 CYP7B1O75881 506 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 TJP3O95049 919 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 ZFXP17010 805 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 KLRC1P26715 233 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 CALML3P27482 149 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 MC4RP32245 332 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 IFNAR2P48551 515 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 PTDSS1P48651 473 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 DNA2P51530 1060 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 PSMD7P51665 324 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 GPSM2P81274 684 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 RNASELQ05823 741 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 LRRC63Q05C16 580 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 FZD5Q13467 585 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 CNPY1Q3B7I2 92 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 DAB2IPQ5VWQ8 1189 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 CCDC174Q6PII3 467 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 LONP2Q86WA8 852 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF761Q86XN6 746 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 NME8Q8N427 588 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 FITM2Q8N6M3 262 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 MAGEB6Q8N7X4 407 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 IRGQQ8WZA9 623 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 GFM2Q969S9 779 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF653Q96CK0 615 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 MAGEB18Q96M61 343 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 HAPLN3Q96S86 360 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 RTFDC1Q9BY42 306 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 NACAP1Q9BZK3 213 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 DDX47Q9H0S4 455 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 DPH5Q9H2P9 285 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 TLE6Q9H808 572 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 NLRC4Q9NPP4 1024 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 FAM207AQ9NSI2 230 aaPredicted RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 FGFR1OP2Q9NVK5 253 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 OXSMQ9NWU1 459 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 GALNT8Q9NY28 637 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 INTUQ9ULD6 942 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 ZNF510Q9Y2H8 683 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 BZW2Q9Y6E2 419 aaKnown RBP8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 USH1CQ9Y6N9 552 aa8.08□□□□□ -1.12
UBE2D3-204ENST00000349311 A0A1B0GVG6 124 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 UBE2Q2LH0YL09 131 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 TRAFD1O14545 582 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 TTI1O43156 1089 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 PFDN1O60925 122 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 ATP6V1G1O75348 118 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 MAFO75444 373 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 UFL1O94874 794 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 KLHL18O94889 574 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 AFPP02771 609 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 SHBGP04278 402 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 BPIP17213 487 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 KLRK1P26718 216 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 MARK3P27448 753 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 UBA7P41226 1012 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 POLGP54098 1239 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 RNASE9P60153 205 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 PTENP60484 403 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 DR1Q01658 176 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 KLHL30Q0D2K2 578 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 AP1B1Q10567 949 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 STRN3Q13033 797 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 DHCR24Q15392 516 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 SMAD2Q15796 467 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 SLC4A8Q2Y0W8 1093 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 CCDC92Q53HC0 331 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 FAM26FQ5R3K3 315 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 DUPD1Q68J44 220 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 CENPPQ6IPU0 288 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 PPP1R21Q6ZMI0 780 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 TRMT10CQ7L0Y3 403 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 PEX26Q7Z412 305 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 NELFCDQ8IXH7 590 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 ST13P4Q8IZP2 240 aaPredicted RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 KIAA1958Q8N8K9 716 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 ADAMTS17Q8TE56 1095 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 NSUN4Q96CB9 384 aaKnown RBP8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 AK8Q96MA6 479 aa8.07□□□□□ -1.12
UBE2D3-204ENST00000349311 CATSPER2Q96P56 530 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms