RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 MSLNLQ96KJ4 702 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 GKN1Q9NS71 199 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 ZMYM5Q9UJ78 669 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 CDH22Q9UJ99 828 aa28.08■■■□□ 2.09
SSBP4-202ENST00000348495 ZNF185O15231 689 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 URI1O94763 535 aaPredicted RBP28.07■■■□□ 2.08
SSBP4-202ENST00000348495 KDELR1P24390 212 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 L1CAMP32004 1257 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 KCNQ1P51787 676 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 ZXDBP98169 803 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 TAZQ16635 292 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 EFHC2Q5JST6 749 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 POTEHQ6S545 545 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 ANKS1BQ7Z6G8 1248 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 PLD4Q96BZ4 506 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 RBM41Q96IZ5 413 aaKnown RBP28.07■■■□□ 2.08
SSBP4-202ENST00000348495 HAPLN3Q96S86 360 aa28.07■■■□□ 2.08
SSBP4-202ENST00000348495 LRRD1A4D1F6 860 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 PI4K2BG5E9Z4 385 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 APOEP02649 317 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CKMP06732 381 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 HABP4Q5JVS0 413 aaKnown RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 NUGGCQ68CJ6 796 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 AADACL2Q6P093 401 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 Q7L0L9 218 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CMTM8Q8IZV2 173 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 KCTD6Q8NC69 237 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 ADAMTS19Q8TE59 1207 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 RNF25Q96BH1 459 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CDX2Q99626 313 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 DHX35Q9H5Z1 703 aaKnown RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CPQQ9Y646 472 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 PAGE1O75459 146 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 STC2O76061 302 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 HMBSP08397 361 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CD48P09326 243 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 SEMA3BQ13214 749 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 PDK2Q15119 407 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 ZFYVE27Q5T4F4 411 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 MFSD7Q6UXD7 560 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 VSIG1Q86XK7 387 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CREG2Q8IUH2 290 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 PYROXD2Q8N2H3 581 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 RASGEF1CQ8N431 466 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 KCTD15Q96SI1 283 aaPredicted RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 OSBPL2Q9H1P3 480 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 PCDH18Q9HCL0 1135 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 SMPD4Q9NXE4 827 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 XPO7Q9UIA9 1087 aaKnown RBP28.06■■■□□ 2.08
SSBP4-202ENST00000348495 CDC23Q9UJX2 597 aa28.06■■■□□ 2.08
SSBP4-202ENST00000348495 IL4RP24394 825 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 CDKN2BP42772 138 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 CDH6P55285 790 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 COPS2P61201 443 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 DPYSL3Q14195 570 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 UNC45BQ8IWX7 931 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 MICALL1Q8N3F8 863 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 MYLIPQ8WY64 445 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 ING5Q8WYH8 240 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 TSC1Q92574 1164 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 BTN2A3PQ96KV6 586 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 ZSWIM3Q96MP5 696 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 ARHGAP26Q9UNA1 814 aa28.05■■■□□ 2.08
SSBP4-202ENST00000348495 FSHRP23945 695 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 PTPN7P35236 360 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 MTA1Q13330 715 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 TUBB2AQ13885 445 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 SPOCD1Q6ZMY3 1216 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 WBP2Q969T9 261 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 TUBB2BQ9BVA1 445 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 TTC7AQ9ULT0 858 aaPredicted RBP28.04■■■□□ 2.08
SSBP4-202ENST00000348495 MRFAP1Q9Y605 127 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 CEP104O60308 925 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 GREM1O60565 184 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 KLKB1P03952 638 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 ARTNQ5T4W7 220 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 CES5AQ6NT32 575 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 MAP7D3Q8IWC1 876 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 AZIN2Q96A70 460 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 MS4A14Q96JA4 679 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 C1orf74Q96LT6 269 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 GUCD1Q96NT3 240 aa28.04■■■□□ 2.08
SSBP4-202ENST00000348495 HELZP42694 1942 aaKnown RBP28.03■■■□□ 2.08
SSBP4-202ENST00000348495 ZNF487B1APH4 448 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 MOCS2O96007 188 aaPredicted RBP28.03■■■□□ 2.08
SSBP4-202ENST00000348495 WEE1P30291 646 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 KRT81Q14533 505 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 PPP2R5EQ16537 467 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 ATAT1Q5SQI0 421 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 CCDC50Q8IVM0 306 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 ATP6V0D2Q8N8Y2 350 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 ZNF670Q9BS34 389 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 OR12D3Q9UGF7 316 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 SLC12A6Q9UHW9 1150 aa28.03■■■□□ 2.08
SSBP4-202ENST00000348495 FAM72CH0Y354 149 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 AVPR1AP37288 418 aa28.02■■■□□ 2.08
SSBP4-202ENST00000348495 HARS2P49590 506 aaKnown RBP28.02■■■□□ 2.08
SSBP4-202ENST00000348495 MLLT6P55198 1093 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-202ENST00000348495 NRG1Q02297 640 aaPredicted RBP28.02■■■□□ 2.08
SSBP4-202ENST00000348495 CBX2Q14781 532 aaPredicted RBP28.02■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms