RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 FBXO46Q6PJ61 603 aaPredicted RBP13.27□□□□□ -0.28
CLK3-201ENST00000345005 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 BNIPLQ7Z465 357 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 CTU1Q7Z7A3 348 aaKnown RBP13.27□□□□□ -0.28
CLK3-201ENST00000345005 EXOC3L1Q86VI1 746 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 RELL1Q8IUW5 271 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 FBF1Q8TES7 1133 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 ZNF670Q9BS34 389 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 TRIM62Q9BVG3 475 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 RHOBTB2Q9BYZ6 727 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 PPP1R12CQ9BZL4 782 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 ZCWPW1Q9H0M4 648 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 PPCSQ9HAB8 311 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 GPATCH2LQ9NWQ4 482 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 LGALS13Q9UHV8 139 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 ANAPC5Q9UJX4 755 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 RPL26L1Q9UNX3 145 aaKnown RBP13.27□□□□□ -0.28
CLK3-201ENST00000345005 MYO16Q9Y6X6 1858 aa13.27□□□□□ -0.28
CLK3-201ENST00000345005 BRCA2P51587 3418 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 YJEFN3A6XGL0 299 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 M0QYT0 321 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 SGK1O00141 431 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 MCF2LO15068 1137 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 TGM2P21980 687 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 IL4RP24394 825 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 L1CAMP32004 1257 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 RASSF2P50749 326 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 SLC18A1P54219 525 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 NCALDP61601 193 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.29
CLK3-201ENST00000345005 STAT4Q14765 748 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 NFE2Q16621 373 aaPredicted RBP13.27□□□□□ -0.29
CLK3-201ENST00000345005 FAM133BQ5BKY9 247 aaKnown RBP13.27□□□□□ -0.29
CLK3-201ENST00000345005 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 HFE2Q6ZVN8 426 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 HOMEZQ8IX15 550 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 TEX9Q8N6V9 391 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 ANKLE1Q8NAG6 615 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 ARMC2Q8NEN0 867 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 FAF2Q96CS3 445 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 SLC9A7Q96T83 725 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 ADAM33Q9BZ11 813 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 DHX35Q9H5Z1 703 aaKnown RBP13.27□□□□□ -0.29
CLK3-201ENST00000345005 PRDM16Q9HAZ2 1276 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 AP4E1Q9UPM8 1137 aa13.27□□□□□ -0.29
CLK3-201ENST00000345005 TMEM120BA0PK00 339 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 TCP11X1B4DZS4 312 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 APOL1O14791 398 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 CDH16O75309 829 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 UBOX5O94941 541 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 F9P00740 461 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 FYNP06241 537 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 ZFXP17010 805 aaPredicted RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 GATMP50440 423 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 RABGGTBP53611 331 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 ITGA8P53708 1063 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 AIF1P55008 147 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 EIF3EP60228 445 aaKnown RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 IL9RQ01113 521 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 DEUP1Q05D60 604 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 IKBKEQ14164 716 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 NAA25Q14CX7 972 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 SETDB1Q15047 1291 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 CA9Q16790 459 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 PARP6Q2NL67 630 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 PPP6R3Q5H9R7 873 aaPredicted RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 VARS2Q5ST30 1063 aaKnown RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 FAM171A1Q5VUB5 890 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 SYPL2Q5VXT5 272 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 DEFB128Q7Z7B8 93 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 EPS8L3Q8TE67 593 aaKnown RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 NSMCE1Q8WV22 266 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 FUBP3Q96I24 572 aaKnown RBP eCLIP13.26□□□□□ -0.29
CLK3-201ENST00000345005 SH3GL3Q99963 347 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 TMEM121Q9BTD3 319 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 PCDH9Q9HC56 1237 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 TMEM39AQ9NV64 488 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 SAE1Q9UBE0 346 aaPredicted RBP13.26□□□□□ -0.29
CLK3-201ENST00000345005 PRKAG3Q9UGI9 489 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 TBX21Q9UL17 535 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 FZD10Q9ULW2 581 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 ATP11BQ9Y2G3 1177 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 USP3Q9Y6I4 520 aa13.26□□□□□ -0.29
CLK3-201ENST00000345005 OR6C75A6NL08 312 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 SMIM23A6NLE4 172 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 HNRNPCL1O60812 293 aaKnown RBP13.25□□□□□ -0.29
CLK3-201ENST00000345005 CCNB1P14635 433 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 ALDH3A1P30838 453 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 STIP1P31948 543 aaKnown RBP13.25□□□□□ -0.29
CLK3-201ENST00000345005 STX2P32856 288 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 RFC2P35250 354 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 GRIK1P39086 918 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 SLC11A1P49279 550 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 VPS41P49754 854 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 ATXN1P54253 815 aaKnown RBP13.25□□□□□ -0.29
CLK3-201ENST00000345005 BCAR1P56945 870 aa13.25□□□□□ -0.29
CLK3-201ENST00000345005 MRPL58Q14197 206 aaKnown RBP13.25□□□□□ -0.29
CLK3-201ENST00000345005 NOMO1Q15155 1222 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms