RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 PPP1R13BQ96KQ4 1090 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 LACRTQ9GZZ8 138 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 THAP2Q9H0W7 228 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 ISCUQ9H1K1 167 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 LHX5Q9H2C1 402 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 SYNCQ9H7C4 482 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 FBRSL1Q9HCM7 1045 aaKnown RBP14.39□□□□□ -0.11
TPM4-202ENST00000344824 ADAM22Q9P0K1 906 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 MARCH2Q9P0N8 246 aa14.39□□□□□ -0.11
TPM4-202ENST00000344824 YJEFN3A6XGL0 299 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 E7ENQ6 273 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 CCP110O43303 1012 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 DRD1P21728 446 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 CDH5P33151 784 aaPredicted RBP14.38□□□□□ -0.11
TPM4-202ENST00000344824 OPRD1P41143 372 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 DAOAP59103 153 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 PTPN20Q4JDL3 420 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 ZC3H14Q6PJT7 736 aaKnown RBP14.38□□□□□ -0.11
TPM4-202ENST00000344824 C12orf40Q86WS4 652 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 ERICH1Q86X53 443 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 REXO1L1PQ8IX06 675 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 MCOLN2Q8IZK6 566 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
TPM4-202ENST00000344824 NAT16Q8N8M0 369 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 CTNNBL1Q8WYA6 563 aaPredicted RBP14.38□□□□□ -0.11
TPM4-202ENST00000344824 KCTD13Q8WZ19 329 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 FAM149B1Q96BN6 582 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 OTUB2Q96DC9 234 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 ARHGEF26Q96DR7 871 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 IER2Q9BTL4 223 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 CNGB3Q9NQW8 809 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 SPHK2Q9NRA0 654 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 TJP2Q9UDY2 1190 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 FBXO4Q9UKT5 387 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 GUCA1BQ9UMX6 200 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 EML5Q05BV3 1969 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 SPAG17Q6Q759 2223 aa14.38□□□□□ -0.11
TPM4-202ENST00000344824 MACROD2A1Z1Q3 448 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 ANKRD62A6NC57 917 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 NEDD8-MDP1E9PL57 170 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 STC2O76061 302 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 LTFP02788 710 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 CORO1AP31146 461 aaKnown RBP14.37□□□□□ -0.11
TPM4-202ENST00000344824 CXCL12P48061 93 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 GAD2Q05329 585 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 KIF5AQ12840 1032 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 PDCLQ13371 301 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 HEATR6Q6AI08 1181 aaKnown RBP14.37□□□□□ -0.11
TPM4-202ENST00000344824 PM20D1Q6GTS8 502 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 PKN3Q6P5Z2 889 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 KLHDC10Q6PID8 442 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 RHBDF2Q6PJF5 856 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 MON1BQ7L1V2 547 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 BHLHA9Q7RTU4 235 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 ADGRG2Q8IZP9 1017 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 TXLNBQ8N3L3 684 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 SPEM1Q8N4L4 309 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 MSANTD4Q8NCY6 345 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 RPLP0P6Q8NHW5 317 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 SLC35F5Q8WV83 523 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 NOX5Q96PH1 765 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 CPXM1Q96SM3 734 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 PRMT8Q9NR22 394 aaPredicted RBP14.37□□□□□ -0.11
TPM4-202ENST00000344824 OLA1Q9NTK5 396 aaKnown RBP14.37□□□□□ -0.11
TPM4-202ENST00000344824 SFMBT1Q9UHJ3 866 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 PAXBP1Q9Y5B6 917 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 DUSP10Q9Y6W6 482 aa14.37□□□□□ -0.11
TPM4-202ENST00000344824 ESPNB1AK53 854 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 GOLGA8SH3BPF8 625 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 MSI1O43347 362 aaKnown RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 ERBB2P04626 1255 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 APODP05090 189 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 TMEM253P0C7T8 217 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 NBL1P41271 181 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 ARHGAP25P42331 645 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 SLC6A11P48066 632 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 NAP1L1P55209 391 aaKnown RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 COG7P83436 770 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 BSPRYQ5W0U4 402 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 HTR3DQ70Z44 454 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 TMEM25Q86YD3 366 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 PHF13Q86YI8 300 aaPredicted RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 SYNPOQ8N3V7 929 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 IPO4Q8TEX9 1081 aaKnown RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 NKD2Q969F2 451 aaPredicted RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 HSFY1Q96LI6 401 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 BBS2Q9BXC9 721 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 TSGA10Q9BZW7 698 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 ARHGEF4Q9NR80 690 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 ABCC13Q9NSE7 274 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 C2orf42Q9NWW7 574 aa14.36□□□□□ -0.11
TPM4-202ENST00000344824 CNOT8Q9UFF9 292 aaKnown RBP14.36□□□□□ -0.11
TPM4-202ENST00000344824 RIF1Q5UIP0 2472 aaKnown RBP14.35□□□□□ -0.11
TPM4-202ENST00000344824 USP34Q70CQ2 3546 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 FAM186AA6NE01 2351 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 E5RJQ4 531 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 PJA2O43164 708 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 BUB1O43683 1085 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 KRT86O43790 486 aa14.35□□□□□ -0.11
TPM4-202ENST00000344824 GFRA3O60609 400 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms