RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 FOXD2O60548 495 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 APOEP02649 317 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 FYNP06241 537 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 GLI1P08151 1106 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 HNRNPLP14866 589 aaKnown RBP eCLIP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 WASP42768 502 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 EIF4HQ15056 248 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 EFHC1Q5JVL4 640 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 DPY19L2P1Q6NXN4 242 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 TAC4Q86UU9 113 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 ZNF557Q8N988 423 aaPredicted RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 ZC3H10Q96K80 434 aaKnown RBP16.72■□□□□ 0.27
ATG4B-201ENST00000344376 CPXM1Q96SM3 734 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 STK33Q9BYT3 514 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 ASNSD1Q9NWL6 643 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 DAAM1Q9Y4D1 1078 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 CFAP54Q96N23 3096 aa16.72■□□□□ 0.27
ATG4B-201ENST00000344376 PRR5-ARHGAP8B1AHC4 643 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 HSF2BPO75031 334 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 EPN2O95208 641 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 CYP11B1P15538 503 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 CDK11BP21127 795 aaKnown RBP16.71■□□□□ 0.27
ATG4B-201ENST00000344376 HOXD9P28356 352 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-201ENST00000344376 ID4P47928 161 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 ARHGAP8P85298 464 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 ARID5AQ03989 594 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 STARD3Q14849 445 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 GEN1Q17RS7 908 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 PLK5Q496M5 336 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 WDTC1Q8N5D0 677 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 TMEM35BQ8NCS4 154 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 ADAM32Q8TC27 787 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 P2RY11Q96G91 374 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 PIWIL1Q96J94 861 aaKnown RBP16.71■□□□□ 0.27
ATG4B-201ENST00000344376 FCRL2Q96LA5 508 aaPredicted RBP16.71■□□□□ 0.27
ATG4B-201ENST00000344376 GABRG3Q99928 467 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 NAA15Q9BXJ9 866 aaKnown RBP16.71■□□□□ 0.27
ATG4B-201ENST00000344376 FAM204AQ9H8W3 233 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 SEMA4GQ9NTN9 838 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 HCN2Q9UL51 889 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 PCDHGA5Q9Y5G8 931 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 WDR87Q6ZQQ6 2873 aa16.71■□□□□ 0.27
ATG4B-201ENST00000344376 F8VZ95 297 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 DCLK1O15075 740 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 TIMM44O43615 452 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 SDHBP21912 280 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 CDK17Q00537 523 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 TYRO3Q06418 890 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 CSRP2Q16527 193 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 DCAF6Q58WW2 860 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 MPP7Q5T2T1 576 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 SYPL2Q5VXT5 272 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 OR6B2Q6IFH4 312 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 CCDC117Q8IWD4 279 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-201ENST00000344376 HJURPQ8NCD3 748 aaPredicted RBP16.7■□□□□ 0.26
ATG4B-201ENST00000344376 MSANTD4Q8NCY6 345 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 WFIKKN2Q8TEU8 576 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 ACOX2Q99424 681 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 CIPCQ9C0C6 399 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 PARD6AQ9NPB6 346 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 CACNA2D2Q9NY47 1150 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 INVSQ9Y283 1065 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 FRYLO94915 3013 aa16.7■□□□□ 0.26
ATG4B-201ENST00000344376 TRUB2O95900 331 aaKnown RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 MOCS2O96007 188 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 COPB1P53618 953 aaKnown RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 PIK3R6Q5UE93 754 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 FAM183BPQ6ZVS7 135 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 ZDHHC17Q8IUH5 632 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 OLIG1Q8TAK6 271 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 SLC39A13Q96H72 371 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 PCMTD1Q96MG8 357 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 DUSP15Q9H1R2 295 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 ARRDC1-AS1Q9H2J1 176 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 FAM207AQ9NSI2 230 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 ELOVL2Q9NXB9 296 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 THAP10Q9P2Z0 257 aaPredicted RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 TJP2Q9UDY2 1190 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 LIMA1Q9UHB6 759 aaKnown RBP16.69■□□□□ 0.26
ATG4B-201ENST00000344376 SLC12A6Q9UHW9 1150 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 CLEC4EQ9ULY5 219 aa16.69■□□□□ 0.26
ATG4B-201ENST00000344376 A0A1W2PQF6 199 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 MAP3K13O43283 966 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 TBL1XO60907 577 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 LSM8O95777 96 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLC2A3P11169 496 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 TGM1P22735 817 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 TAF5Q15542 800 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 PTPN20Q4JDL3 420 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 FAM133BQ5BKY9 247 aaKnown RBP16.68■□□□□ 0.26
ATG4B-201ENST00000344376 TAF3Q5VWG9 929 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 RFWD3Q6PCD5 774 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SLC2A13Q96QE2 648 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 SPAG5Q96R06 1193 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 GANQ9H2C0 597 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 STON1Q9Y6Q2 735 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 GOLGA6L7A0A1B0GV03 622 aa16.68■□□□□ 0.26
ATG4B-201ENST00000344376 LGALS16A8MUM7 142 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms