RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 SFMBT1Q9UHJ3 866 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 AMACRQ9UHK6 382 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 CORO1AP31146 461 aaKnown RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 MMP13P45452 471 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 GAD2Q05329 585 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 CLEC17AQ6ZS10 378 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 A0A087X0T9 212 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 MYADML2A6NDP7 307 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 RASA4BC9J798 803 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 RASA4O43374 803 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 FAM228BP0C875 321 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 SPDYAQ5MJ70 313 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 SLC9A9Q8IVB4 645 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 ZBED3Q96IU2 234 aaPredicted RBP13.19□□□□□ -0.3
LIN54-201ENST00000340417 APOL2Q9BQE5 337 aa13.19□□□□□ -0.3
LIN54-201ENST00000340417 ENPP3O14638 875 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 AMD1P17707 334 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 RCN2Q14257 317 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 TEKT4Q8WW24 435 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 OPLAHO14841 1288 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 SLC5A3P53794 718 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 PMS2P54278 862 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 PFKPQ01813 784 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 XRCC4Q13426 336 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 SPDYE7PQ495Y7 208 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 PDE12Q6L8Q7 609 aaKnown RBP13.18□□□□□ -0.3
LIN54-201ENST00000340417 B4GALNT4Q76KP1 1039 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 ABHD8Q96I13 439 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 VCPIP1Q96JH7 1222 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 ATP13A3Q9H7F0 1226 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 EPB42P16452 691 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 PTPN3P26045 913 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 MAPK8P45983 427 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 ZKSCAN8Q15776 578 aaPredicted RBP13.18□□□□□ -0.3
LIN54-201ENST00000340417 ZACNQ401N2 412 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 CHST9Q7L1S5 443 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 CRLF3Q8IUI8 442 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 KAT2BQ92831 832 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 GIMAP4Q9NUV9 329 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 VPS26AO75436 327 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 LILRA4P59901 499 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 MRPS5P82675 430 aaKnown RBP13.18□□□□□ -0.3
LIN54-201ENST00000340417 STAT4Q14765 748 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 SPOCD1Q6ZMY3 1216 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 TSTD1Q8NFU3 115 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 POLR1EQ9GZS1 481 aaKnown RBP13.18□□□□□ -0.3
LIN54-201ENST00000340417 KDM4CQ9H3R0 1056 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 ZMYM5Q9UJ78 669 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 CHMP2BQ9UQN3 213 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 GPSM3Q9Y4H4 160 aa13.18□□□□□ -0.3
LIN54-201ENST00000340417 A0A1W2PRU2 124 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 FRMD3A2A2Y4 597 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 GATMP50440 423 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 RASSF2P50749 326 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 FOXD4Q12950 439 aaPredicted RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 C10orf67Q8IYJ2 551 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 COLGALT1Q8NBJ5 622 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 MFSD14AQ96MC6 490 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 BRD8Q9H0E9 1235 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 COPS7BQ9H9Q2 264 aaPredicted RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 NDOR1Q9UHB4 597 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 TTC4O95801 387 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 TGM2P21980 687 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 RAP1GDS1P52306 607 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 OTUD4Q01804 1114 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 INSCQ1MX18 579 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 MARK2Q7KZI7 788 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 XAB2Q9HCS7 855 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 WWOXQ9NZC7 414 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 NEU2Q9Y3R4 380 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 CPQQ9Y646 472 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PKD1L3Q7Z443 1732 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 CTIFO43310 598 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 SPRP35270 261 aaPredicted RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 NNTQ13423 1086 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 ARSHQ5FYA8 562 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 RAET1GQ6H3X3 334 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PPP4R4Q6NUP7 873 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 KLHL23Q8NBE8 558 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 EML4Q9HC35 981 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 KANSL1LA0AUZ9 987 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 SLC11A1P49279 550 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 ZSWIM1Q9BR11 485 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 RAD18Q9NS91 495 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 TDRKHQ9Y2W6 561 aaKnown RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 C5P01031 1676 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 SYNDIG1LA6NDD5 238 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 DYRK3O43781 588 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 GPR1P46091 355 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PSMD8P48556 350 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 DGKEP52429 567 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 PKN3Q6P5Z2 889 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 ZNF571Q7Z3V5 609 aaPredicted RBP13.17□□□□□ -0.3
LIN54-201ENST00000340417 C3orf20Q8ND61 904 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 STAMBPL1Q96FJ0 436 aa13.17□□□□□ -0.3
LIN54-201ENST00000340417 MS4A14Q96JA4 679 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms