RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 SIK2Q9H0K1 926 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 MARCH2Q9P0N8 246 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 RCOR3Q9P2K3 495 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 OR12D3Q9UGF7 316 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 IRAK3Q9Y616 596 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 C2orf71A6NGG8 1288 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 C5orf67F2Z3F1 127 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 LPXNO60711 386 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 GAS8O95995 478 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 MOCS2O96007 188 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 GGCXP38435 758 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 VCPP55072 806 aaKnown RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 TBX4P57082 545 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 EIF3EP60228 445 aaKnown RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 TRIP13Q15645 432 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 DRICH1Q6PGQ1 229 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 TMCO3Q6UWJ1 677 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 SLCO2A1Q92959 643 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 FRMD8P1Q9BZ68 369 aaPredicted RBP15.22■□□□□ 0.03
CBX3-201ENST00000337620 ARHGEF38Q9NXL2 777 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 TRPM5Q9NZQ8 1165 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 NFU1Q9UMS0 254 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 TLR6Q9Y2C9 796 aa15.22■□□□□ 0.03
CBX3-201ENST00000337620 CHD9Q3L8U1 2897 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 MCF2LO15068 1137 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 GRM6O15303 877 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 SEC31AO94979 1220 aaKnown RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 MAP3K6O95382 1288 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 RB1P06400 928 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 ZFXP17010 805 aaPredicted RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 TGM2P21980 687 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 LMNB2Q03252 620 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 UBE3AQ05086 875 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 HLTFQ14527 1009 aaKnown RBP eCLIP15.21■□□□□ 0.03
CBX3-201ENST00000337620 PPP2R5DQ14738 602 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 LILRA6Q6PI73 481 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 RFX8Q6ZV50 586 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 ZC3H18Q86VM9 953 aaKnown RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 SLC35B2Q8TB61 432 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 OVCA2Q8WZ82 227 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 NKD2Q969F2 451 aaPredicted RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 MYRFLQ96LU7 910 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 TGS1Q96RS0 853 aaKnown RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 TMEM121Q9BTD3 319 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 NACA2Q9H009 215 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 C10orf88Q9H8K7 445 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 ARFGAP3Q9NP61 516 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 ARHGEF4Q9NR80 690 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 ETNK2Q9NVF9 386 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 DRG1Q9Y295 367 aaKnown RBP15.21■□□□□ 0.03
CBX3-201ENST00000337620 SNX24Q9Y343 169 aa15.21■□□□□ 0.03
CBX3-201ENST00000337620 SLC12A8A0AV02 714 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 ZNF840PA6NDX5 716 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 PAGE1O75459 146 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 GLUD1P00367 558 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 HMBSP08397 361 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 TPI1P60174 286 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 OASLQ15646 514 aaKnown RBP15.2■□□□□ 0.02
CBX3-201ENST00000337620 DUPD1Q68J44 220 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 B4GALNT4Q76KP1 1039 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 KREMEN2Q8NCW0 462 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 PSMG2Q969U7 264 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 EPAS1Q99814 870 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 SGK1O00141 431 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 LRG1P02750 347 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 ITGAVP06756 1048 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 SRGAP2BP0DMP2 458 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 RBP3P10745 1247 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 SLC2A3P11169 496 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 TNFRSF8P28908 595 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 IRS1P35568 1242 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 PBX2P40425 430 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 SEMA3BQ13214 749 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 CUL1Q13616 776 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 NOMO1Q15155 1222 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 MAP9Q49MG5 647 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 CCDC149Q6ZUS6 474 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 PRUNE1Q86TP1 453 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 ITIH5Q86UX2 942 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 HNRNPLLQ8WVV9 542 aaKnown RBP15.2■□□□□ 0.02
CBX3-201ENST00000337620 TRMT2BQ96GJ1 504 aaKnown RBP15.2■□□□□ 0.02
CBX3-201ENST00000337620 SLC39A13Q96H72 371 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 HAPLN3Q96S86 360 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 CDK5RAP1Q96SZ6 601 aaKnown RBP15.2■□□□□ 0.02
CBX3-201ENST00000337620 OSBPL2Q9H1P3 480 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 CERS4Q9HA82 394 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 FAM114A2Q9NRY5 505 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 ASIC3Q9UHC3 531 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 YBX2Q9Y2T7 364 aaKnown RBP15.2■□□□□ 0.02
CBX3-201ENST00000337620 MFHAS1Q9Y4C4 1052 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 PCDHA11Q9Y5I1 949 aa15.2■□□□□ 0.02
CBX3-201ENST00000337620 KCNU1A8MYU2 1149 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 BHMG1C9JSJ3 638 aaPredicted RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 H7C0C1 242 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 C8AP07357 584 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 ATP5C1P36542 298 aaKnown RBP15.19■□□□□ 0.02
CBX3-201ENST00000337620 ATP5OP48047 213 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 VPS41P49754 854 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 GBE1Q04446 702 aa15.19■□□□□ 0.02
CBX3-201ENST00000337620 CAMK1Q14012 370 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms