RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 TAAR1Q96RJ0 339 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 RUSC1Q9BVN2 902 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 DPY30Q9C005 99 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 C6orf62Q9GZU0 229 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 TCF7L2Q9NQB0 619 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 ING3Q9NXR8 418 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 CROTQ9UKG9 612 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 TMCO1Q9UM00 188 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 PADI4Q9UM07 663 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 TRPM1Q7Z4N2 1603 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 CARNS1A5YM72 827 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 RAD51BO15315 384 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 KATNA1O75449 491 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 AVPR1AP37288 418 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 ADARP55265 1226 aaKnown RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 PTENP60484 403 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 VAC14Q08AM6 782 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 MSLNQ13421 630 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 ZNF280DQ6N043 979 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 USP49Q70CQ1 688 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 MTSS1LQ765P7 747 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 NLNQ9BYT8 704 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 ACTR8Q9H981 624 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 MIEF1Q9NQG6 463 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 KBTBD4Q9NVX7 518 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 DKK3Q9UBP4 350 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 IFRD1O00458 451 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 CYP1A1P04798 512 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 ANXA6P08133 673 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 GCLCP48506 637 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 MAPKAPK2P49137 400 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 AKR1D1P51857 326 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 GTF2A2P52657 109 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 CSNK2BP67870 215 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 TSNQ15631 228 aaKnown RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 C4orf19Q8IY42 314 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 ACTRT2Q8TDY3 377 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 SH2D3AQ9BRG2 576 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 VANGL2Q9ULK5 521 aa13.4□□□□□ -0.26
HLCS-201ENST00000336648 PNMA8BQ9ULN7 279 aaPredicted RBP13.4□□□□□ -0.26
HLCS-201ENST00000336648 TNFRSF21O75509 655 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 UPP2O95045 317 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 ERVK-10P10266 1014 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 RAB27AP51159 221 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 ERVK-24P63145 666 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 SKP1P63208 163 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 GNA13Q14344 377 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 ACAP1Q15027 740 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 RETSATQ6NUM9 610 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 CDC73Q6P1J9 531 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 CASP12Q6UXS9 341 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.27
HLCS-201ENST00000336648 SLITRK2Q9H156 845 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 THAP1Q9NVV9 213 aa13.4□□□□□ -0.27
HLCS-201ENST00000336648 LRRC7Q96NW7 1537 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 FAM20BO75063 409 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 TNFAIP8O95379 198 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 RPN2P04844 631 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 GSTM1P09488 218 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ALOX12P18054 663 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 PGAM1P18669 254 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 CYP24A1Q07973 514 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 TMEM62Q0P6H9 643 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 GSTA3Q16772 222 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 PREPLQ4J6C6 727 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 GJB7Q6PEY0 223 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 RNASE11Q8TAA1 199 aaKnown RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 CAPSLQ8WWF8 208 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 CPNE1Q99829 537 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 L1RE1Q9UN81 338 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ZW10O43264 779 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 STX11O75558 287 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 DDHD2O94830 711 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 CPSF4O95639 269 aaKnown RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 ABCB1P08183 1280 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 HSMCR30P0CW71 290 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ZNF268Q14587 947 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 PDIA6Q15084 440 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 EPC2Q52LR7 807 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ZNF557Q8N988 423 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 ADPRHL2Q9NX46 363 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 H2AFXP16104 143 aaPredicted RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 YWHAQP27348 245 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 EPHB3P54753 998 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 TRAF2Q12933 501 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 TIMM50Q3ZCQ8 353 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 ANGEL2Q5VTE6 544 aaKnown RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 ATG4CQ96DT6 458 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 PNKPQ96T60 521 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 VAT1Q99536 393 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 MYOZ2Q9NPC6 264 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 KANSL3Q9P2N6 904 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 DUSP12Q9UNI6 340 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 PCDHA3Q9Y5H8 950 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 LDLRP01130 860 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 PSMB9P28065 219 aa13.39□□□□□ -0.27
HLCS-201ENST00000336648 GTF2E2P29084 291 aaKnown RBP13.39□□□□□ -0.27
HLCS-201ENST00000336648 MYL6P60660 151 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms