RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 CFAP43Q8NDM7 1665 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LOC110117498-PIK3R3F6TDL0 507 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 MSH4O15457 936 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCNE2O96020 404 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RBP1P09455 135 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC1A3P43003 542 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GRB14Q14449 540 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARHGAP11BQ3KRB8 267 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RDH13Q8NBN7 331 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 URGCPQ8TCY9 931 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 AASSQ9UDR5 926 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNPTGQ9UJJ9 305 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GSTK1Q9Y2Q3 226 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 H0YJX3 145 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 C21orf2O43822 256 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ACAP1Q15027 740 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CARD16Q5EG05 197 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 AADATQ8N5Z0 425 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RASSF1Q9NS23 344 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SEC14L4Q9UDX3 406 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CSADQ9Y600 493 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CIDEAO60543 219 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LDOC1O95751 146 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF24P17028 368 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 TAC1P20366 129 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RANP62826 216 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 HERC3Q15034 1050 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LONRF1Q17RB8 773 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GNASQ5JWF2 1037 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LPCAT4Q643R3 524 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC30A10Q6XR72 485 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 UNC13DQ70J99 1090 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF767PQ75MW2 155 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CLIP3Q96DZ5 547 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ARPC5LQ9BPX5 153 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CIPCQ9C0C6 399 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZC3H12CQ9C0D7 883 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PABPC3Q9H361 631 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCDC86Q9H6F5 360 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PTTG2Q9NZH5 202 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 NDUFB9Q9Y6M9 179 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CES2O00748 559 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 SULT1C4O75897 302 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ASNSP08243 561 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CYP3A4P08684 503 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RALAP11233 206 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ATF2P15336 505 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PRKAR2BP31323 418 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 GMPSP49915 693 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RGS8P57771 180 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 KCNK10P57789 538 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 FGL2Q14314 439 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LPIN1Q14693 890 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 LONP2Q86WA8 852 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 HIPK1Q86Z02 1210 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZC3H7AQ8IWR0 971 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 DNAJC10Q8IXB1 793 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 AOPEPQ8N6M6 819 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGR3Q8TD06 166 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 RSAD2Q8WXG1 361 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF274Q96GC6 653 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 MYOCQ99972 504 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 COPS4Q9BT78 406 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 DSN1Q9H410 356 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PEX16Q9Y5Y5 336 aa6.21□□□□□ -1.42
CDC42BPA-201ENST00000334218 PIK3R2O00459 728 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 FKTNO75072 461 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HSBP1O75506 76 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 IL33O95760 270 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 STAG3L3P0CL85 134 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TNFAIP3P21580 790 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 AMPD1P23109 780 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 TCF7P36402 384 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CACNA2D1P54289 1103 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RBM6P78332 1123 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 BTKQ06187 659 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GALNT1Q10472 559 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZNF284Q2VY69 593 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 OR4Q3Q8NH05 313 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CERS2Q96G23 380 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 CCDC177Q9NQR7 707 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SPTLC3Q9NUV7 552 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 DNAAF2Q9NVR5 837 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 EME2A4GXA9 379 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 DISC1C4P0D8 188 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 POLR1CO15160 346 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ULK1O75385 1050 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 GCNT3O95395 438 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 RBM34P42696 430 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 COASYQ13057 564 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 KIF19Q2TAC6 998 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 HPS3Q969F9 1004 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 DNAJC1Q96KC8 554 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 COG8Q96MW5 612 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 C7orf50Q9BRJ6 194 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 ZYG11BQ9C0D3 744 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 NMNAT1Q9HAN9 279 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 SLC40A1Q9NP59 571 aa6.2□□□□□ -1.42
CDC42BPA-201ENST00000334218 AGPAT3Q9NRZ7 376 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms