RNA–Protein interactions for RNA: ENST00000319420.3

SHISA2-201, Transcript of shisa family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA2, Length 2,860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA2-201ENST00000319420 SESN2P58004 480 aaPredicted RBP16.47■□□□□ 0.23
SHISA2-201ENST00000319420 PTK7Q13308 1070 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 ICE2Q659A1 982 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 STRADAQ7RTN6 431 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 PRPF39Q86UA1 669 aaKnown RBP16.47■□□□□ 0.23
SHISA2-201ENST00000319420 VPS52Q8N1B4 723 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 TMEM86AQ8N2M4 240 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 TTC25Q96NG3 672 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 TKTL2Q9H0I9 626 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 PRDM12Q9H4Q4 367 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 CCDC134Q9H6E4 229 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 NKIRAS1Q9NYS0 192 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 RABGEF1Q9UJ41 708 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 CDH23Q9H251 3354 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 F7P08709 466 aaPredicted RBP16.47■□□□□ 0.23
SHISA2-201ENST00000319420 CA4P22748 312 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 ATP5DP30049 168 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 YWHAHQ04917 246 aaPredicted RBP16.47■□□□□ 0.23
SHISA2-201ENST00000319420 DDR2Q16832 855 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 SLC45A4Q5BKX6 768 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 YTHDF3Q7Z739 585 aaKnown RBP16.47■□□□□ 0.23
SHISA2-201ENST00000319420 PGBD4Q96DM1 585 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 FOXP3Q9BZS1 431 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 GGA2Q9UJY4 613 aa16.47■□□□□ 0.23
SHISA2-201ENST00000319420 NUP205Q92621 2012 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 RALGAPA2Q2PPJ7 1873 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 ABHD2P08910 425 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 GRK4P32298 578 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 RPL9P32969 192 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 CLLU1OSQ5K130 101 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 CD300LGQ6UXG3 332 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 CCDC121Q6ZUS5 278 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 UNC5BQ8IZJ1 945 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 PPM1NQ8N819 430 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 PDCD7Q8N8D1 485 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 TFB1MQ8WVM0 346 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 WDCPQ9H6R7 721 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 TCRBV9S1A1TA0A576 114 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 CCDC78A2IDD5 438 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 ERCC2P18074 760 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 MSH2P43246 934 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 WDR4P57081 412 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 TPI1P60174 286 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 GRIK3Q13003 919 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 DSC3Q14574 896 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 KCNJ11Q14654 390 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 INTS6LQ5JSJ4 861 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 CES3Q6UWW8 571 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 MRPL10Q7Z7H8 261 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 TTC9BQ8N6N2 239 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 LINC01599Q8WXQ3 324 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 FAM193BQ96PV7 902 aaPredicted RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 FRMD8P1Q9BZ68 369 aaPredicted RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 UBP1Q9NZI7 540 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 ZC3H7BQ9UGR2 993 aaKnown RBP16.46■□□□□ 0.23
SHISA2-201ENST00000319420 IKBKGQ9Y6K9 419 aa16.46■□□□□ 0.23
SHISA2-201ENST00000319420 GOLGA6L7A0A1B0GV03 622 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 PQBP1O60828 265 aaKnown RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 ZNF623O75123 536 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 EPHB2P29323 1055 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 PHBP35232 272 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 RPA3P35244 121 aaPredicted RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 ADRA1BP35368 520 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 TRIM71Q2Q1W2 868 aaKnown RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 RFX8Q6ZV50 586 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 TRABD2AQ86V40 505 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 CDKL3Q8IVW4 592 aaPredicted RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 CCDC197Q8NCU1 140 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 HTR3CQ8WXA8 447 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 SLC17A6Q9P2U8 582 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 ATXN2Q99700 1313 aaKnown RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 RNF103O00237 685 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 UGT1A9O60656 530 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 HOXD10P28358 340 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 FOXN2P32314 431 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 RAB27AP51159 221 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 TSPY1Q01534 308 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 DBF4BQ8NFT6 615 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 USP33Q8TEY7 942 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 CKAP2Q8WWK9 683 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 CCT6BQ92526 530 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 P2RY11Q96G91 374 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 SMC6Q96SB8 1091 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 APOL2Q9BQE5 337 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 COLEC11Q9BWP8 271 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 UGT1A7Q9HAW7 530 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 UGT1A10Q9HAW8 530 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 UGT1A8Q9HAW9 530 aa16.45■□□□□ 0.22
SHISA2-201ENST00000319420 HMX1Q9NP08 348 aaPredicted RBP16.45■□□□□ 0.22
SHISA2-201ENST00000319420 UPP2O95045 317 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 RPL34P49207 117 aaKnown RBP16.44■□□□□ 0.22
SHISA2-201ENST00000319420 PID1Q7Z2X4 250 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 TAC4Q86UU9 113 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 CAND1Q86VP6 1230 aaKnown RBP16.44■□□□□ 0.22
SHISA2-201ENST00000319420 ABI1Q8IZP0 508 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 ATAD1Q8NBU5 361 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 KCTD13Q8WZ19 329 aa16.44■□□□□ 0.22
SHISA2-201ENST00000319420 SCLYQ96I15 445 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms