RNA–Protein interactions for RNA: ENST00000319223.8

LRRC42-201, Transcript of leucine rich repeat containing 42, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC42, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC42-201ENST00000319223 CPXM2Q8N436 756 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 NT5C3BQ969T7 300 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 IQCDQ96DY2 449 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 TBCBQ99426 244 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 RAB6CQ9H0N0 254 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 NUCKS1Q9H1E3 243 aaKnown RBP17.26■□□□□ 0.35
LRRC42-201ENST00000319223 CHRDQ9H2X0 955 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 C2orf42Q9NWW7 574 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 CLEC4EQ9ULY5 219 aa17.26■□□□□ 0.35
LRRC42-201ENST00000319223 K7EQS6 105 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 PENKP01210 267 aaPredicted RBP17.25■□□□□ 0.35
LRRC42-201ENST00000319223 MTAPQ13126 283 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 TDRD12Q587J7 1177 aaKnown RBP17.25■□□□□ 0.35
LRRC42-201ENST00000319223 DGKKQ5KSL6 1271 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 ADGRF1Q5T601 910 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 CFAP57Q96MR6 1250 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 PNKPQ96T60 521 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 ANLNQ9NQW6 1124 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 WDR35Q9P2L0 1181 aa17.25■□□□□ 0.35
LRRC42-201ENST00000319223 KCNU1A8MYU2 1149 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 GALR2O43603 387 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 CACNG3O60359 315 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 LATS1O95835 1130 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SERPING1P05155 500 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 DRD1P21728 446 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 RRM1P23921 792 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 HOXC13P31276 330 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SULT1E1P49888 294 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 GSCP56915 257 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 C1QBPQ07021 282 aaKnown RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 WDR59Q6PJI9 974 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 MAML2Q8IZL2 1156 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 AZIN2Q96A70 460 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 PIGVQ9NUD9 493 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 DNAJC17Q9NVM6 304 aaKnown RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 POLR3BQ9NW08 1133 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 ARHGAP20Q9P2F6 1191 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 ADAMTS1Q9UHI8 967 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 ATG2BQ96BY7 2078 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 I6L893 689 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 KAT7O95251 611 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 CALB1P05937 261 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 CISD3P0C7P0 127 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 RFC1P35251 1148 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 EIF2DP41214 584 aaKnown RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SLC11A2P49281 568 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 ADKP55263 362 aaKnown RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 TCF15Q12870 199 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 TBX2Q13207 712 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 LRRC32Q14392 662 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SLC25A52Q3SY17 297 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SH3PXD2AQ5TCZ1 1133 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 TMC6Q7Z403 805 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 DDI1Q8WTU0 396 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 RXFP2Q8WXD0 754 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 ARHGEF4Q9NR80 690 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 SPATA6Q9NWH7 488 aaPredicted RBP17.24■□□□□ 0.35
LRRC42-201ENST00000319223 FBXO10Q9UK96 956 aa17.24■□□□□ 0.35
LRRC42-201ENST00000319223 KIAA1549LQ6ZVL6 1849 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 C2CD4BA6NLJ0 364 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 ATMINO43313 823 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 RNF40O75150 1001 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 FTLP02792 175 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 CHRM1P11229 460 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 KRT3P12035 628 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 HNRNPH3P31942 346 aaKnown RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 GBP1P32455 592 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 SEC13P55735 322 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 C15orf59Q2T9L4 293 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 CCDC14Q49A88 953 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 EMC10Q5UCC4 262 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 PIK3R6Q5UE93 754 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 RAP1GAP2Q684P5 730 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 ARCQ7LC44 396 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 BNIPLQ7Z465 357 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 C1orf210Q8IVY1 113 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 C3orf20Q8ND61 904 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 PRICKLE1Q96MT3 831 aaPredicted RBP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 DNAJC7Q99615 494 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 SELENOOQ9BVL4 669 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 TMPRSS4Q9NRS4 437 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.23■□□□□ 0.35
LRRC42-201ENST00000319223 DEC1Q9P2X7 70 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 STAP1Q9ULZ2 295 aa17.23■□□□□ 0.35
LRRC42-201ENST00000319223 A0A087X0T9 212 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 A0A0A0MRY4 1105 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 ADCY5O95622 1261 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 APOEP02649 317 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 FAM228BP0C875 321 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 GZMAP12544 262 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 HOXD9P28356 352 aaPredicted RBP17.22■□□□□ 0.35
LRRC42-201ENST00000319223 CCR1P32246 355 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 CXCR3P49682 368 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 ZNF75DP51815 510 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 RPL7AP62424 266 aaKnown RBP17.22■□□□□ 0.35
LRRC42-201ENST00000319223 ATP11AP98196 1134 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 DEUP1Q05D60 604 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 TRIM14Q14142 442 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 ARID5BQ14865 1188 aa17.22■□□□□ 0.35
LRRC42-201ENST00000319223 MPPE1Q53F39 396 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms