RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 MAGEA10P43363 369 aaPredicted RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 BCAR1P56945 870 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 ELF3P78545 371 aaPredicted RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 ATP11AP98196 1134 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 BNIP1Q12981 228 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TIGD5Q53EQ6 642 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 SWT1Q5T5J6 900 aaKnown RBP14.68□□□□□ -0.06
VRK3-201ENST00000316763 TRNP1Q6NT89 227 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 DCLRE1AQ6PJP8 1040 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 OLFML1Q6UWY5 402 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 C4orf22Q6V702 233 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 TMEM110Q86TL2 294 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 URGCPQ8TCY9 931 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 FAM172AQ8WUF8 416 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 KIF9Q9HAQ2 790 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 PHTF1Q9UMS5 762 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 PCDHB7Q9Y5E2 793 aa14.68□□□□□ -0.06
VRK3-201ENST00000316763 PTPRSQ13332 1948 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 IQANK1A0A1B0GTG1 560 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 ZNF487B1APH4 448 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 MGRN1O60291 552 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 B4GALT3O60512 393 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 BAIAP3O94812 1187 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 PDGFRBP09619 1106 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 GTF2A1P52655 376 aaPredicted RBP14.67□□□□□ -0.06
VRK3-201ENST00000316763 WDR5P61964 334 aaKnown RBP14.67□□□□□ -0.06
VRK3-201ENST00000316763 KCNJ11Q14654 390 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 CGB2Q6NT52 195 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 PMF1Q6P1K2 205 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 PSRC1Q6PGN9 363 aaPredicted RBP14.67□□□□□ -0.06
VRK3-201ENST00000316763 FAM47EQ6ZV65 393 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 ZNF280BQ86YH2 543 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 COLGALT2Q8IYK4 626 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 PLD5Q8N7P1 536 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 MAGEC3Q8TD91 643 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 TNIP3Q96KP6 325 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 TBC1D13Q9NVG8 400 aa14.67□□□□□ -0.06
VRK3-201ENST00000316763 TNRC18O15417 2968 aaPredicted RBP14.67□□□□□ -0.06
VRK3-201ENST00000316763 M0QZQ0 153 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 MDM4O15151 490 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 TM9SF1O15321 606 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 KCNN4O15554 427 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 EFCAB14O75071 495 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 DDHD2O94830 711 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 ZBED1O96006 694 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 ELK3P41970 407 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 LHX1P48742 406 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 NCALDP61601 193 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 DEFB103AP81534 67 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 CBLBQ13191 982 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 DNAJC3Q13217 504 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 SLC1A5Q15758 541 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 LVRNQ6Q4G3 990 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 TTC30AQ86WT1 665 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 SLC35F5Q8WV83 523 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 DCAKDQ8WVC6 231 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 RTP4Q96DX8 246 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 PIWIL1Q96J94 861 aaKnown RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 ZNF670Q9BS34 389 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 KLC2Q9H0B6 622 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 PCDH18Q9HCL0 1135 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 FAM49BQ9NUQ9 324 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 GGT7Q9UJ14 662 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 CHMP2BQ9UQN3 213 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 USH1CQ9Y6N9 552 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 BCLAF3A2AJT9 711 aaKnown RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 TMEM189-UBE2V1I3L0A0 370 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 EDF1O60869 148 aaKnown RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 ATP5HO75947 161 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 UPP2O95045 317 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 MT-ND3P03897 115 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 CYP11A1P05108 521 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 NQO1P15559 274 aaKnown RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 ZFXP17010 805 aaPredicted RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 SKIV2L2P42285 1042 aaKnown RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 YWHAGP61981 247 aaKnown RBP eCLIP14.66□□□□□ -0.06
VRK3-201ENST00000316763 EFTUD2Q15029 972 aaKnown RBP eCLIP14.66□□□□□ -0.063e-6■■□□□ 13.2
VRK3-201ENST00000316763 SLC9A4Q6AI14 798 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 DSTYKQ6XUX3 929 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 TBC1D1Q86TI0 1168 aaPredicted RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 FITM2Q8N6M3 262 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 B3GALNT2Q8NCR0 500 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 HERVK_113Q902F9 699 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 CASD1Q96PB1 797 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 USP29Q9HBJ7 922 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 RAB6BQ9NRW1 208 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 CXXC1Q9P0U4 656 aaPredicted RBP14.66□□□□□ -0.06
VRK3-201ENST00000316763 LRFN2Q9ULH4 789 aa14.66□□□□□ -0.06
VRK3-201ENST00000316763 TDRD15B5MCY1 1934 aaKnown RBP14.65□□□□□ -0.06
VRK3-201ENST00000316763 ZBBXA8MT70 800 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 DCTN3O75935 186 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 INHBAP08476 426 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 ODC1P11926 461 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 SLC8A1P32418 973 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 SCNN1AP37088 669 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 PTPN9P43378 593 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 RAB6CQ53S08 254 aa14.65□□□□□ -0.06
VRK3-201ENST00000316763 FYB2Q5VWT5 728 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms