RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 KCNK16Q96T55 309 aa14.27□□□□□ -0.12
MKS1-201ENST00000313863 MPHOSPH6Q99547 160 aaKnown RBP14.27□□□□□ -0.12
MKS1-201ENST00000313863 GORASP1Q9BQQ3 440 aa14.27□□□□□ -0.12
MKS1-201ENST00000313863 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.12
MKS1-201ENST00000313863 C20orf27Q9GZN8 174 aa14.27□□□□□ -0.12
MKS1-201ENST00000313863 HACD1B0YJ81 288 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 AP1G2O75843 785 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 STAU1O95793 577 aaKnown RBP14.27□□□□□ -0.13
MKS1-201ENST00000313863 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.13
MKS1-201ENST00000313863 NFICP08651 508 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 MCF2P10911 925 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 CYP2F1P24903 491 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 RPS12P25398 132 aaKnown RBP14.27□□□□□ -0.13
MKS1-201ENST00000313863 PDE1BQ01064 536 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 CNPY1Q3B7I2 92 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 HEATR6Q6AI08 1181 aaKnown RBP14.27□□□□□ -0.13
MKS1-201ENST00000313863 ZCCHC23Q6ZST2 131 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 RAPH1Q70E73 1250 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 ZNF534Q76KX8 674 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 PLPPR4Q7Z2D5 763 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 SLC26A7Q8TE54 656 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 HPDLQ96IR7 371 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 BTBD9Q96Q07 612 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 NT5C1AQ9BXI3 368 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 PRMT7Q9NVM4 692 aaPredicted RBP14.27□□□□□ -0.13
MKS1-201ENST00000313863 HMGXB4Q9UGU5 601 aa14.27□□□□□ -0.13
MKS1-201ENST00000313863 SMIM31A0A1B0GVY4 71 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 MEI4A8MW99 385 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 ZNF189O75820 626 aaPredicted RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 METTL18O95568 372 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 RPL10AP62906 217 aaKnown RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 SLC25A3Q00325 362 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 SLC6A3Q01959 620 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 CCDC153Q494R4 210 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 PDPK2PQ6A1A2 396 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 JADE1Q6IE81 842 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 TRNP1Q6NT89 227 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 PACS1Q6VY07 963 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 DPH6Q7L8W6 267 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 EBF3Q9H4W6 596 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 XPNPEP3Q9NQH7 507 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 EIF2B3Q9NR50 452 aaKnown RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 TXNDC16Q9P2K2 825 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 BCAP29Q9UHQ4 241 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 CDH22Q9UJ99 828 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 TSPAN16Q9UKR8 245 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 ARHGAP26Q9UNA1 814 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 CDY2AQ9Y6F7 541 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 CDY1Q9Y6F8 540 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 TRIP11Q15643 1979 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 SPDYE16A6NNV3 312 aaPredicted RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 LACTBL1A8MY62 500 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 OPHN1O60890 802 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 LGR5O75473 907 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 USP1O94782 785 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 PABPC4LP0CB38 370 aaKnown RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 PGAM1P18669 254 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 IDH3AP50213 366 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 NIPAL4Q0D2K0 466 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 GRM2Q14416 872 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 PPP6R3Q5H9R7 873 aaPredicted RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 EEF1DP3Q658K8 133 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 CASC4Q6P4E1 433 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 SLC25A41Q8N5S1 370 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 GDPD5Q8WTR4 605 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 WRNIP1Q96S55 665 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 Q9H521 79 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
MKS1-201ENST00000313863 SCAF8Q9UPN6 1271 aaKnown RBP14.26□□□□□ -0.13
MKS1-201ENST00000313863 ZSWIM8A7E2V4 1837 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 TPP1O14773 563 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 CASQ2O14958 399 aaPredicted RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 RNASEH1O60930 286 aaKnown RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 H2AFYO75367 372 aaKnown RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 GSRP00390 522 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 STAG3L1P0CL83 205 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 EDNRBP24530 442 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 SERPINB6P35237 376 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 HARS2P49590 506 aaKnown RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 SLC26A2P50443 739 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 NDST1P52848 882 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 EPHB1P54762 984 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 ABCE1P61221 599 aaKnown RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 RBP5P82980 135 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 PDE1CQ14123 709 aaPredicted RBP14.25□□□□□ -0.13
MKS1-201ENST00000313863 DPYSL2Q16555 572 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 GOLGA7BQ2TAP0 167 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 METTL21CQ5VZV1 264 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 DPY19L2Q6NUT2 758 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 LRRC8BQ6P9F7 803 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 OLFML1Q6UWY5 402 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 NT5DC4Q86YG4 428 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 MPP5Q8N3R9 675 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 FBXW8Q8N3Y1 598 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 LRRC71Q8N4P6 559 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 ICA1LQ8NDH6 482 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 PYDC1Q8WXC3 89 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 JDP2Q8WYK2 163 aa14.25□□□□□ -0.13
MKS1-201ENST00000313863 ZNF778Q96MU6 729 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms