RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 TTC26A0AVF1 554 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CYP26A1O43174 497 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CYP3A5P20815 502 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DGKAP23743 735 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 S100GP29377 79 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SOX6P35712 828 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 GALCP54803 685 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 COPZ1P61923 177 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 BTNL9Q6UXG8 535 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZC3H18Q86VM9 953 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NATD1Q8N6N6 113 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RNF25Q96BH1 459 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ELMO2Q96JJ3 720 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C17orf62Q9BQA9 187 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 OSBPL2Q9H1P3 480 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SMURF2Q9HAU4 748 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 UBA2Q9UBT2 640 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 POLLQ9UGP5 575 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC24A2Q9UI40 661 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CORO1CQ9ULV4 474 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 EFR3BQ9Y2G0 817 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PRG3Q9Y2Y8 225 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 E7ENQ6 273 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 UBE2Q2LH0YL09 131 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 POLRMTO00411 1230 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MSH4O15457 936 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FTCDO95954 541 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SERPIND1P05546 499 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NUP107P57740 925 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DUSP28Q4G0W2 176 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATP6AP1LQ52LC2 224 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ARMC12Q5T9G4 340 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 LRIG3Q6UXM1 1119 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 OTOP1Q7RTM1 612 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CCNYL1Q8N7R7 359 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC22A18Q96BI1 424 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 DACH2Q96NX9 599 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TTLL2Q9BWV7 592 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZYG11BQ9C0D3 744 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CCDC90BQ9GZT6 254 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 IRF2BPLQ9H1B7 796 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 VPS45Q9NRW7 570 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 LRRC4BQ9NT99 713 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFA13Q9P0J0 144 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZFP69BQ9UJL9 534 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ENTPD4Q9Y227 616 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 TBC1D30Q9Y2I9 924 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ARFGEF2Q9Y6D5 1785 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF142P52746 1687 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RGPD1P0DJD0 1748 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 F8W810 466 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 IRAK2O43187 625 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RHOBTB1O94844 696 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SEC24BO95487 1268 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CTCFP49711 727 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NDUFV1P49821 464 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATP1A2P50993 1020 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PMS1P54277 932 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MRPS22P82650 360 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NOMO2Q5JPE7 1267 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 EPHA10Q5JZY3 1008 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SPANXN3Q5MJ09 141 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CELF3Q5SZQ8 465 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 AGBL2Q5U5Z8 902 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 R3HCC1LQ7Z5L2 792 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ZNF507Q8TCN5 953 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 RERGQ96A58 199 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CDCA5Q96FF9 252 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FAIM2Q9BWQ8 316 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ADNPQ9H2P0 1102 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ATXN3LQ9H3M9 355 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ELOVL6Q9H5J4 265 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CACNA2D2Q9NY47 1150 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 UBP1Q9NZI7 540 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NOP53Q9NZM5 478 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 FBXO2Q9UK22 296 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MEGF6O75095 1541 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ASTN2O75129 1339 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NUP205Q92621 2012 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 ABHD14A-ACY1A0A1B0GW23 586 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 KLHL33A6NCF5 533 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CST8O60676 142 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 IMPDH2P12268 514 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NPR3P17342 541 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CACNB1Q02641 598 aaPredicted RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NR1I3Q14994 352 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PTGES3Q15185 160 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CNGA2Q16280 664 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MFSD4BQ5TF39 518 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 GPR142Q7Z601 462 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 PRPF39Q86UA1 669 aaKnown RBP3.27□□□□□ -1.89
CLOCK-201ENST00000309964 NT5DC3Q86UY8 548 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 C11orf74Q86VG3 221 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 VSIG10LQ86VR7 867 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 MON1AQ86VX9 555 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 HORMAD1Q86X24 394 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 SLC9A9Q8IVB4 645 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 CAMKK1Q8N5S9 505 aa3.27□□□□□ -1.89
CLOCK-201ENST00000309964 OR8D1Q8WZ84 308 aa3.27□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms