RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 DICER1Q9UPY3 1922 aaKnown RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 C17orf102A2RUQ5 167 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 STK10O94804 968 aaKnown RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 MYL2P10916 166 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 NCAM1P13591 858 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 NPR3P17342 541 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 C16orf46Q6P387 395 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 DSTYKQ6XUX3 929 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 LONP2Q86WA8 852 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 ARID3BQ8IVW6 561 aaPredicted RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 GSDMBQ8TAX9 411 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 P2RY11Q96G91 374 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 EBNA1BP2Q99848 306 aaKnown RBP11.92□□□□□ -0.5
PTPN2-201ENST00000309660 APOL2Q9BQE5 337 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 RHOBTB2Q9BYZ6 727 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 PHACTR1Q9C0D0 580 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 DNAI2Q9GZS0 605 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 TXNDC16Q9P2K2 825 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 FETUBQ9UGM5 382 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 NUMBLQ9Y6R0 609 aa11.92□□□□□ -0.5
PTPN2-201ENST00000309660 EEF2KO00418 725 aaKnown RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 USP17L7P0C7H9 530 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 GMPRP36959 345 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 PNPLA4P41247 253 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SARNPP82979 210 aaKnown RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 UBXN11Q5T124 520 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 ALKAL1Q6UXT8 129 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 CCDC91Q7Z6B0 441 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 TTC7BQ86TV6 843 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 NUDCD3Q8IVD9 361 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 FBXO41Q8TF61 875 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 RNF34Q969K3 372 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SIGLEC10Q96LC7 697 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 STAP1Q9ULZ2 295 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 NRP1O14786 923 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 AP1G2O75843 785 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 HAUS5O94927 633 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 FAM200BP0CF97 657 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 ALADP13716 330 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 MAP2K2P36507 400 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 ABCG1P45844 678 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 HUNKP57058 714 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 CDC42EP1Q00587 391 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 PDE1BQ01064 536 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SLC25A52Q3SY17 297 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 RGS9BPQ6ZS82 235 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 ZNF534Q76KX8 674 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SMG8Q8ND04 991 aaKnown RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 HSFY1Q96LI6 401 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 RAB3IPQ96QF0 476 aaPredicted RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 NCAPGQ9BPX3 1015 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 TBC1D10AQ9BXI6 508 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 PLAC1Q9HBJ0 212 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 PIGVQ9NUD9 493 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SNX10Q9Y5X0 201 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 TRIP12Q14669 1992 aaPredicted RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 H3BRJ5 948 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 M0QZ92 97 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 MRPS5P82675 430 aaKnown RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 MAP2K5Q13163 448 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 RCN2Q14257 317 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 GNASQ5JWF2 1037 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 CXCL17Q6UXB2 119 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 CLNKQ7Z7G1 428 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 KIRREL3Q8IZU9 778 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 DNAAF3Q8N9W5 541 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 SENP8Q96LD8 212 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 QKIQ96PU8 341 aaKnown RBP eCLIP11.91□□□□□ -0.52e-6■■■■■ 36.6
PTPN2-201ENST00000309660 FERMT1Q9BQL6 677 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 DUSP16Q9BY84 665 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 TSPYL2Q9H2G4 693 aaPredicted RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 DDIT4Q9NX09 232 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 UBP1Q9NZI7 540 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 GNEQ9Y223 722 aaKnown RBP11.91□□□□□ -0.5
PTPN2-201ENST00000309660 INPP5FQ9Y2H2 1132 aa11.91□□□□□ -0.5
PTPN2-201ENST00000309660 PLXNA1Q9UIW2 1896 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 A0A0A0MRY4 1105 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 MYBPHLA2RUH7 354 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 YJEFN3A6XGL0 299 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 E7ENQ6 273 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FAM72CH0Y354 149 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 PTGESO14684 152 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 XPO1O14980 1071 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 DIAPH2O60879 1101 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 NR2C2P49116 596 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 CPT1AP50416 773 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 BST1Q10588 318 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FAM72AQ5TYM5 149 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FAM72DQ6L9T8 149 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 CLEC20AQ6ZU45 233 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 RFX8Q6ZV50 586 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 ASRGL1Q7L266 308 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FAM72BQ86X60 149 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 USP6NLQ92738 828 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 UTP4Q969X6 686 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 SPATA13Q96N96 652 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 RILPQ96NA2 401 aa11.9□□□□□ -0.5
PTPN2-201ENST00000309660 SSU72Q9NP77 194 aaKnown RBP11.9□□□□□ -0.5
PTPN2-201ENST00000309660 FZD10Q9ULW2 581 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms