RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 RFC2P35250 354 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 GBE1Q04446 702 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-205ENST00000307859 DPYSQ14117 519 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 CNKSR3Q6P9H4 555 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 CROCCP2Q86T23 111 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 TAC4Q86UU9 113 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 CDKL3Q8IVW4 592 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-205ENST00000307859 PPIL6Q8IXY8 311 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 NAT8LQ8N9F0 302 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 ADAM32Q8TC27 787 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 DQX1Q8TE96 717 aaKnown RBP12.3□□□□□ -0.44
TRIM40-205ENST00000307859 CPT1BQ92523 772 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 EDEM1Q92611 657 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 PWWP2AQ96N64 755 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 OLFM3Q96PB7 478 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 GAS2L1Q99501 681 aaPredicted RBP12.3□□□□□ -0.44
TRIM40-205ENST00000307859 ZNF576Q9H609 170 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 ANLNQ9NQW6 1124 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 TMPRSS4Q9NRS4 437 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 NINJ2Q9NZG7 142 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 COX16Q9P0S2 106 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 PCDHB5Q9Y5E4 795 aa12.3□□□□□ -0.44
TRIM40-205ENST00000307859 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 I6L893 689 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ZNF135P52742 658 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 YWHAGP61981 247 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 IFFO1Q0D2I5 559 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SLC10A2Q12908 348 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 KRT71Q3SY84 523 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SLC45A4Q5BKX6 768 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 EMC10Q5UCC4 262 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DEFB128Q7Z7B8 93 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 RBM15Q96T37 977 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 OXCT2Q9BYC2 517 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 LRRC4CQ9HCJ2 640 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DTLQ9NZJ0 730 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ATP11BQ9Y2G3 1177 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 PRUNE2Q8WUY3 3088 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 HACD1B0YJ81 288 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DCLK1O15075 740 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 KCNN4O15554 427 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DGKIO75912 1065 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 AMHP03971 560 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DNAJB2P25686 324 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 RBL1P28749 1068 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 HCAR3P49019 387 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SMARCB1Q12824 385 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 CBLBQ13191 982 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 IKBKEQ14164 716 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 PAFAH1B3Q15102 231 aaKnown RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ARL13BQ3SXY8 428 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SCD5Q86SK9 330 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 TMEM173Q86WV6 379 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 CEP57Q86XR8 500 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SCN4BQ8IWT1 228 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 NUP93Q8N1F7 819 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SH2D3CQ8N5H7 860 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 BCL7CQ8WUZ0 217 aaPredicted RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SMOC2Q9H3U7 446 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ABCC13Q9NSE7 274 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ETNK2Q9NVF9 386 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 DNAJC17Q9NVM6 304 aaKnown RBP12.29□□□□□ -0.44
TRIM40-205ENST00000307859 IL37Q9NZH6 218 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 PAK5Q9P286 719 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 SCML2Q9UQR0 700 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 MFHAS1Q9Y4C4 1052 aa12.29□□□□□ -0.44
TRIM40-205ENST00000307859 ANAPC1Q9H1A4 1944 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 H7C4K7 107 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 EEF2KO00418 725 aaKnown RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 IRAK2O43187 625 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 MFSD11O43934 449 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ACSL3O95573 720 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ABHD2P08910 425 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 CLTBP09497 229 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 MAGEA4P43358 317 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 MAGEA6P43360 314 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 NRLP54845 237 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 SKOR1P84550 965 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 GPR17Q13304 367 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 KCNJ11Q14654 390 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 KYNUQ16719 465 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 RTP2Q5QGT7 225 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ANKRD22Q5VYY1 191 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 BTBD8Q5XKL5 378 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 KCTD16Q68DU8 428 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 KCNT2Q6UVM3 1135 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 C4orf22Q6V702 233 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 KDM7AQ6ZMT4 941 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 RFX8Q6ZV50 586 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 ANKS3Q6ZW76 656 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 B4GALNT4Q76KP1 1039 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 BZW1Q7L1Q6 419 aaKnown RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 RNF168Q8IYW5 571 aaPredicted RBP12.28□□□□□ -0.44
TRIM40-205ENST00000307859 SPPL2BQ8TCT7 592 aa12.28□□□□□ -0.44
TRIM40-205ENST00000307859 TLCD1Q96CP7 247 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms