RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 GALCP54803 685 aa13.71□□□□□ -0.21
TRIM56-201ENST00000306085 MAGEE2Q8TD90 523 aaPredicted RBP13.71□□□□□ -0.21
TRIM56-201ENST00000306085 IFRD1O00458 451 aaPredicted RBP13.71□□□□□ -0.22
TRIM56-201ENST00000306085 ITGB6P18564 788 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 BRSK2Q8IWQ3 736 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 NSMCE2Q96MF7 247 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 CRNNQ9UBG3 495 aaPredicted RBP13.71□□□□□ -0.22
TRIM56-201ENST00000306085 IL13P35225 146 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 FDFT1P37268 417 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 TMEM143Q96AN5 459 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 AIFM2Q9BRQ8 373 aa13.71□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 LSM3P62310 102 aaKnown RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF177Q13360 481 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 DALRD3Q5D0E6 543 aaKnown RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 LRRC70Q7Z2Q7 622 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ZNF655Q8N720 491 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 C17orf50Q8WW18 174 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 EFHD2Q96C19 240 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 C9orf16Q9BUW7 83 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 NCAPD2Q15021 1401 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ATP6V1G2O95670 118 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CDKL1Q00532 357 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 RAPSNQ13702 412 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CAMK1DQ8IU85 385 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 MEIOBQ8N635 442 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 RNF146Q9NTX7 359 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 USP17L10C9JJH3 530 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 SH3BGRLO75368 114 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ATP2C1P98194 919 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 GNA13Q14344 377 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 DENND6BQ8NEG7 585 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 UBA3Q8TBC4 463 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 COPS4Q9BT78 406 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 NT5C1AQ9BXI3 368 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 EHD1Q9H4M9 534 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 NEK6Q9HC98 313 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 UBDO15205 165 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 PRH1P02810 166 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 AP3S1Q92572 193 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 COMTP21964 271 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 RFC5P40937 340 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 AMHR2Q16671 573 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ZDHHC13Q8IUH4 622 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CLHC1Q8NHS4 586 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 RAET1EQ8TD07 263 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 AHCYL2Q96HN2 611 aaKnown RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 TBATAQ96M53 351 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 NUP50Q9UKX7 468 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 TMCO1Q9UM00 188 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 FOXN3O00409 490 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 PTGS2P35354 604 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 HAUS6Q7Z4H7 955 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CARNMT1Q8N4J0 409 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 HPS1Q92902 700 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ANTXR1Q9H6X2 564 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ARHGAP28Q9P2N2 729 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 WRBO00258 174 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 KCNH1O95259 989 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CDH3P22223 829 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 PFKFB3Q16875 520 aaPredicted RBP13.7□□□□□ -0.22
TRIM56-201ENST00000306085 OXER1Q8TDS5 423 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 SLITRK1Q96PX8 696 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ERP44Q9BS26 406 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 RASSF1Q9NS23 344 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 MDM4O15151 490 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 BGNP21810 368 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 MYL9P24844 172 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 ITFG1Q8TB96 612 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 MSH4O15457 936 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 MAP3K6O95382 1288 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 FMO5P49326 533 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 AHSPQ9NZD4 102 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 CIDEBQ9UHD4 219 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 PRKAB1Q9Y478 270 aa13.7□□□□□ -0.22
TRIM56-201ENST00000306085 LRG1P02750 347 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 GPSM2P81274 684 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TXNDC11Q6PKC3 985 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 UGT2B28Q9BY64 529 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 PDGFCQ9NRA1 345 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 PLD1Q13393 1074 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 XRCC4Q13426 336 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 SNRNP35Q16560 246 aaKnown RBP13.69□□□□□ -0.22
TRIM56-201ENST00000306085 AGMOQ6ZNB7 445 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ARMC8Q8IUR7 673 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 HPS3Q969F9 1004 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TEKT5Q96M29 485 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CHP1Q99653 195 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 FKBP6O75344 327 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 ACADMP11310 421 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 IL12AP29459 219 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 SLC22A9Q8IVM8 553 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 DPY30Q9C005 99 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CLN6Q9NWW5 311 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 CLEC4AQ9UMR7 237 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 MRC2Q9UBG0 1479 aa13.69□□□□□ -0.22
TRIM56-201ENST00000306085 TRIM64A6NGJ6 449 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 108.3 ms