RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PPP1R13BQ96KQ4 1090 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 SPACA7Q96KW9 195 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 GABRG3Q99928 467 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 TAB2Q9NYJ8 693 aa27.52■■■□□ 2
CDKN2A-201ENST00000304494 IRAK2O43187 625 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 TSPAN3O60637 253 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 HOXD9P28356 352 aaPredicted RBP27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 WASP42768 502 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 DRAP1Q14919 205 aaPredicted RBP27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 EIF4HQ15056 248 aaKnown RBP27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 GEN1Q17RS7 908 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 PASD1Q8IV76 773 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 WDTC1Q8N5D0 677 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 RMDN1Q96DB5 314 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 DDX50Q9BQ39 737 aaKnown RBP27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 LSM14BQ9BX40 385 aaKnown RBP27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 FHOD1Q9Y613 1164 aa27.51■■□□□ 1.99
CDKN2A-201ENST00000304494 ACSL4O60488 711 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 UCHL3P15374 230 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 MPP7Q5T2T1 576 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 FCRL2Q96LA5 508 aaPredicted RBP27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 CPXM1Q96SM3 734 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 ACOX2Q99424 681 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 ARRDC1-AS1Q9H2J1 176 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 INVSQ9Y283 1065 aa27.5■■□□□ 1.99
CDKN2A-201ENST00000304494 A0A1W2PQF6 199 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 TIMM44O43615 452 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 GLI1P08151 1106 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 PNMA6AP0CW24 399 aaPredicted RBP27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 P2RY2P41231 377 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 KRT31Q15323 416 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 EFHC1Q5JVL4 640 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 SYPL2Q5VXT5 272 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 PRR23CQ6ZRP0 262 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 TAC4Q86UU9 113 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 NAA15Q9BXJ9 866 aaKnown RBP27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 VPS16Q9H269 839 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 PLCB1Q9NQ66 1216 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 FANCLQ9NW38 375 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 ASNSD1Q9NWL6 643 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 CACNA2D2Q9NY47 1150 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 CLEC4EQ9ULY5 219 aa27.49■■□□□ 1.99
CDKN2A-201ENST00000304494 MYL5Q02045 173 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 PUM1Q14671 1186 aaKnown RBP eCLIP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 RSPO4Q2I0M5 234 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 FKBP15Q5T1M5 1219 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 PMS2CLQ68D20 193 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 C11orf57Q6ZUT1 292 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 ZNF557Q8N988 423 aaPredicted RBP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 C1orf131Q8NDD1 294 aaKnown RBP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 ANKRD20A12PQ8NF67 263 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 ADAM32Q8TC27 787 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 IPO4Q8TEX9 1081 aaKnown RBP27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 SLC39A13Q96H72 371 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 PDCL3Q9H2J4 239 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 SYNCQ9H7C4 482 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 ELOVL2Q9NXB9 296 aa27.48■■□□□ 1.99
CDKN2A-201ENST00000304494 TYW5A2RUC4 315 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 GABRG2P18507 467 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 ARID5AQ03989 594 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 FAM133BQ5BKY9 247 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 PIK3R6Q5UE93 754 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 WFIKKN2Q8TEU8 576 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 STK33Q9BYT3 514 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 CIPCQ9C0C6 399 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 DLL3Q9NYJ7 618 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 THAP10Q9P2Z0 257 aaPredicted RBP27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 TJP2Q9UDY2 1190 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 CDV3Q9UKY7 258 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 DYNC1LI1Q9Y6G9 523 aaKnown RBP27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 STON1Q9Y6Q2 735 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 DCHS1Q96JQ0 3298 aa27.47■■□□□ 1.99
CDKN2A-201ENST00000304494 HSF2BPO75031 334 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 APOEP02649 317 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 CYP11B1P15538 503 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 MPLP40238 635 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 STARD3Q14849 445 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 DCAF6Q58WW2 860 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 RFWD3Q6PCD5 774 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 TMEM35BQ8NCS4 154 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 CD248Q9HCU0 757 aa27.46■■□□□ 1.99
CDKN2A-201ENST00000304494 GOLGA6L7A0A1B0GV03 622 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 F8VZ95 297 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 MAP3K13O43283 966 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 TBL1XO60907 577 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 TRUB2O95900 331 aaKnown RBP27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 IGLV3-25P01717 112 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 ZNF806P0C7X5 589 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 BCKDHBP21953 392 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 HLA-FP30511 346 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 SLC6A4P31645 630 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 CDK17Q00537 523 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 TAF5Q15542 800 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 PLA2G2CQ5R387 149 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 OR6B2Q6IFH4 312 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 KIAA1211LQ6NV74 962 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 ZDHHC17Q8IUH5 632 aa27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 C12orf50Q8NA57 414 aaPredicted RBP27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 HJURPQ8NCD3 748 aaPredicted RBP27.45■■□□□ 1.98
CDKN2A-201ENST00000304494 RLN3Q8WXF3 142 aa27.45■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms