RNA–Protein interactions for RNA: ENST00000302731.4

CLP1-201, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

TSL 2 BASIC

Gene CLP1, Length 1,634 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-201ENST00000302731 ZMYND8Q9ULU4 1186 aaPredicted RBP10.96□□□□□ -0.65
CLP1-201ENST00000302731 VWA8A3KMH1 1905 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TET1Q8NFU7 2136 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SYNJ2BP-COX16A0A087WUM0 186 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PPP1R12AO14974 1030 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 CREB3O43889 395 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CDH16O75309 829 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TMEM63AO94886 807 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 OR4Q2P0C623 313 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ATN1P54259 1190 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 TPI1P60174 286 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 MAGOHP61326 146 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 PDIA2Q13087 525 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 IKBKEQ14164 716 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PPP2R5DQ14738 602 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PRKD1Q15139 912 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 TRIM60Q495X7 471 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 UBAP2Q5T6F2 1119 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 ANKRD22Q5VYY1 191 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 POTEHQ6S545 545 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TAOK1Q7L7X3 1001 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TAC4Q86UU9 113 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TDRPQ86YL5 185 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SCN4BQ8IWT1 228 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 MCUQ8NE86 351 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ADAM32Q8TC27 787 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 EPS8L3Q8TE67 593 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 EDEM1Q92611 657 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 C9orf72Q96LT7 481 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 HAPLN3Q96S86 360 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TKTL2Q9H0I9 626 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 LRRC4CQ9HCJ2 640 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PRDM10Q9NQV6 1147 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ETNK2Q9NVF9 386 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 DNAJC17Q9NVM6 304 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 COX16Q9P0S2 106 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 BCCIPQ9P287 314 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLP1-201ENST00000302731 LGALS13Q9UHV8 139 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SLC12A6Q9UHW9 1150 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 XPO7Q9UIA9 1087 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 PCNTO95613 3336 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 FNDC1Q4ZHG4 1894 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 A0A0A0MRY4 1105 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TLDC2A0PJX2 215 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CARNS1A5YM72 827 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 I6L893 689 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 MFSD11O43934 449 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 OPHN1O60890 802 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SPAG6O75602 509 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 STK10O94804 968 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 RTN3O95197 1032 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 EFEMP2O95967 443 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 MYCP01106 439 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 ERCC2P18074 760 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TPSB2P20231 275 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PHBP35232 272 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SERPINB6P35237 376 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 FDFT1P37268 417 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 MDH1P40925 334 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 PSEN1P49768 467 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 GATMP50440 423 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CCL23P55773 120 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CDK16Q00536 496 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 NRG1Q02297 640 aaPredicted RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 TPSAB1Q15661 275 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 MSANTD2Q6P1R3 559 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 LEKR1Q6ZMV7 388 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CTU1Q7Z7A3 348 aaKnown RBP10.95□□□□□ -0.66
CLP1-201ENST00000302731 SCD5Q86SK9 330 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 CEP57Q86XR8 500 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ZBED8Q8IZ13 594 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 VPS52Q8N1B4 723 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ZNF333Q96JL9 665 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SPATA17Q96L03 361 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SPATA13Q96N96 652 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 SERPINB11Q96P15 392 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 TTPALQ9BTX7 342 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PPP1R12CQ9BZL4 782 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 ANLNQ9NQW6 1124 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 RAB6BQ9NRW1 208 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 OR12D3Q9UGF7 316 aa10.95□□□□□ -0.66
CLP1-201ENST00000302731 PLXNA3P51805 1871 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 SCN5AQ14524 2016 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 MICAL3Q7RTP6 2002 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 MTMR11A4FU01 709 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 MTSS1O43312 755 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 SLC2A3P11169 496 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 ATP2A2P16615 1042 aaKnown RBP10.94□□□□□ -0.66
CLP1-201ENST00000302731 MX2P20592 715 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 HOXC13P31276 330 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 CCR1P32246 355 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 HPDP32754 393 aaPredicted RBP10.94□□□□□ -0.66
CLP1-201ENST00000302731 MMP13P45452 471 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 CENPFP49454 3210 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 IRAK1P51617 712 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 ZNF33AQ06730 810 aa10.94□□□□□ -0.66
CLP1-201ENST00000302731 NR1H3Q13133 447 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms