RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 FAM72BQ86X60 149 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ALLCQ8N6M5 410 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 AENQ8WTP8 325 aaKnown RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 OVCA2Q8WZ82 227 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF512Q96ME7 567 aaPredicted RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 EPAS1Q99814 870 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TMEM121Q9BTD3 319 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF446Q9NWS9 450 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 DRG1Q9Y295 367 aaKnown RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TLR6Q9Y2C9 796 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 CCDC85CA6NKD9 419 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SGK1O00141 431 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TGM5O43548 720 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TLR5O60602 858 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SPATA31D3P0C874 917 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 RBP3P10745 1247 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 HMGA1P17096 107 aaKnown RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 GGCXP38435 758 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TNNT3P45378 269 aaPredicted RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 RPL21P46778 160 aaKnown RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 VPS41P49754 854 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TPI1P60174 286 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 ERVFC1P60507 584 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SEMA3BQ13214 749 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 PLD1Q13393 1074 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 PPP2R5DQ14738 602 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 PLPP4Q5VZY2 271 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 NCBP2-AS2Q69YL0 99 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SPATA31D4Q6ZUB0 917 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 RFX8Q6ZV50 586 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SPRED2Q7Z698 418 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 MIB1Q86YT6 1006 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 EIF1ADQ8N9N8 165 aaKnown RBP13.45□□□□□ -0.26
CCDC7-202ENST00000302316 POF1BQ8WVV4 589 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 EMILIN2Q9BXX0 1053 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 CCSER2Q9H7U1 834 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 TMEM51Q9NW97 253 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 SNX10Q9Y5X0 201 aa13.45□□□□□ -0.26
CCDC7-202ENST00000302316 GRXCR1A8MXD5 290 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 ARHGEF15O94989 841 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 MAP3K6O95382 1288 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 TBX18O95935 607 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 MOCS2O96007 188 aaPredicted RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 KRT14P02533 472 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 ECHS1P30084 290 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF135P52742 658 aaPredicted RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 EPHB3P54753 998 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 DRG2P55039 364 aaKnown RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 TBX4P57082 545 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 FAM109BQ6ICB4 259 aaPredicted RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 EMBQ6PCB8 327 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 ZC3H18Q86VM9 953 aaKnown RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 CCDC89Q8N998 374 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 GDAP1L1Q96MZ0 367 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 KLHL5Q96PQ7 755 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 CDK5RAP1Q96SZ6 601 aaKnown RBP13.44□□□□□ -0.26
CCDC7-202ENST00000302316 C10orf88Q9H8K7 445 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 TLR9Q9NR96 1032 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 ETNK2Q9NVF9 386 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 MARCH2Q9P0N8 246 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 OR12D3Q9UGF7 316 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 NEU2Q9Y3R4 380 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 NR2E3Q9Y5X4 410 aa13.44□□□□□ -0.26
CCDC7-202ENST00000302316 H7C0C1 242 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 KLRC2P26717 231 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 ATP5OP48047 213 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 GBE1Q04446 702 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 NNTQ13423 1086 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 DPYSQ14117 519 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SHHQ15465 462 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 DARS2Q6PI48 645 aaKnown RBP13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SPPL3Q8TCT6 385 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 CCHCR1Q8TD31 782 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 RSAD2Q8WXG1 361 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.43□□□□□ -0.264e-7■■■■■ 58.1
CCDC7-202ENST00000302316 TRMT2BQ96GJ1 504 aaKnown RBP13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SLC39A13Q96H72 371 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 FCRL2Q96LA5 508 aaPredicted RBP13.43□□□□□ -0.26
CCDC7-202ENST00000302316 MYRFLQ96LU7 910 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 HAPLN3Q96S86 360 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 OSBPL2Q9H1P3 480 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 NEUROG2Q9H2A3 272 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 PRDM16Q9HAZ2 1276 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 TRPM5Q9NZQ8 1165 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 MFHAS1Q9Y4C4 1052 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 IRAK3Q9Y616 596 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 ZNF840PA6NDX5 716 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 HIDE1A8MVS5 230 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 PAGE1O75459 146 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 LRIG2O94898 1065 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 IFNB1P01574 187 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 APOEP02649 317 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 CA3P07451 260 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 SLC2A3P11169 496 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 DNAJB1P25685 340 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 ADCY8P40145 1251 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 NR2C2P49116 596 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 PLTPP55058 493 aa13.43□□□□□ -0.26
CCDC7-202ENST00000302316 UBE3AQ05086 875 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms