RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 MYO1HQ8N1T3 1032 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 BPIFB6Q8NFQ5 453 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 ITFG1Q8TB96 612 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 CAMKK2Q96RR4 588 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 LSM7Q9UK45 103 aaKnown RBP15.21■□□□□ 0.03
SCN3B-201ENST00000299333 ATXN2Q99700 1313 aaKnown RBP15.21■□□□□ 0.02
SCN3B-201ENST00000299333 PCNAP12004 261 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 ARF4P18085 180 aaPredicted RBP15.21■□□□□ 0.02
SCN3B-201ENST00000299333 ERVK-9P63128 1117 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 SPP2Q13103 211 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 QPRTQ15274 297 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 TTMPQ5BVD1 217 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 KIAA1683Q9H0B3 1180 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.21■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF224Q9NZL3 707 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 CORO1CQ9ULV4 474 aaPredicted RBP15.21■□□□□ 0.02
SCN3B-201ENST00000299333 TET3O43151 1660 aa15.21■□□□□ 0.02
SCN3B-201ENST00000299333 CBFA2T3O75081 653 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ETS1P14921 441 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SLC25A24Q6NUK1 477 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 VMP1Q96GC9 406 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 RSL24D1Q9UHA3 163 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF609O15014 1411 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 MED14O60244 1454 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 DBTP11182 482 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 PAICSP22234 425 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 NOS3P29474 1203 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 TTKP33981 857 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SKIV2L2P42285 1042 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 RPL5P46777 297 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 CASP4P49662 377 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 NR1H2P55055 460 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 TUBA4AP68366 448 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SPIRE1Q08AE8 756 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SULT1C3Q6IMI6 304 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 TSEN2Q8NCE0 465 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF671Q8TAW3 534 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 MMP19Q99542 508 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SENP2Q9HC62 589 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ARHGAP20Q9P2F6 1191 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ENTPD5O75356 428 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 YWHAZP63104 245 aaKnown RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 CIAPIN1Q6FI81 312 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 DNAJC14Q6Y2X3 702 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF571Q7Z3V5 609 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SLC22A9Q8IVM8 553 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 FAM129BQ96TA1 746 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SYNDIG1Q9H7V2 258 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ATXN10Q9UBB4 475 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 UGGT1Q9NYU2 1555 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 PSMD11O00231 422 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 ALDH1A1P00352 501 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 SLC20A2Q08357 652 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 FGD3Q5JSP0 725 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 FBXW8Q8N3Y1 598 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 AGPAT3Q9NRZ7 376 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 NINJ2Q9NZG7 142 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 TRPC4Q9UBN4 977 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 VTI1BQ9UEU0 232 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 PALLDQ8WX93 1383 aa15.2■□□□□ 0.02
SCN3B-201ENST00000299333 TBX3O15119 743 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 PLA2G6O60733 806 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 IL18RAPO95256 599 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 MPOP05164 745 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ELK3P41970 407 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 NUMBP49757 651 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 SAMD4BQ5PRF9 694 aaKnown RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 GPR107Q5VW38 600 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 FNDC5Q8NAU1 212 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF512Q96ME7 567 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 NAT9Q9BTE0 207 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 BAIAP2Q9UQB8 552 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 IQGAP3Q86VI3 1631 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 CYP11B1P15538 503 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF37AP17032 561 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 POU5F1Q01860 360 aaKnown RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 NDUFAF6Q330K2 333 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 TTC7BQ86TV6 843 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 PCDH20Q8N6Y1 951 aaKnown RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 MTG1Q9BT17 334 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ELOVL6Q9H5J4 265 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 WDCPQ9H6R7 721 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 KATNA1O75449 491 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 TPBGLP0DKB5 382 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 LBPP18428 481 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ADRA1DP25100 572 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 OLR1P78380 273 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 MGAT5Q09328 741 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 PKN1Q16512 942 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 PYDC2Q56P42 97 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ATF7IP2Q5U623 682 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ZNF544Q6NX49 715 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 CRELD2Q6UXH1 353 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 SSTR1P30872 391 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 CCNG1P51959 295 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 SLC25A3Q00325 362 aa15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ZIK1Q3SY52 487 aaPredicted RBP15.19■□□□□ 0.02
SCN3B-201ENST00000299333 ATP13A5Q4VNC0 1218 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms