RNA–Protein interactions for RNA: ENST00000295927.3

PTX3-201, Transcript of pentraxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTX3, Length 1,940 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX3-201ENST00000295927 GGCXP38435 758 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 DPYSQ14117 519 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 HIBCHQ6NVY1 386 aaPredicted RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 RFX8Q6ZV50 586 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 UBLCP1Q8WVY7 318 aaPredicted RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 COMMD8Q9NX08 183 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 AFF4Q9UHB7 1163 aaKnown RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 MSI1O43347 362 aaKnown RBP23.65■■□□□ 1.38
PTX3-201ENST00000295927 GJB5O95377 273 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 TAF10Q12962 218 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 MSANTD2Q6P1R3 559 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 USP29Q9HBJ7 922 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 ARHGEF38Q9NXL2 777 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 DTLQ9NZJ0 730 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 SNX10Q9Y5X0 201 aa23.65■■□□□ 1.38
PTX3-201ENST00000295927 BCLAF3A2AJT9 711 aaKnown RBP23.64■■□□□ 1.37
PTX3-201ENST00000295927 SLC38A8A6NNN8 435 aa23.64■■□□□ 1.37
PTX3-201ENST00000295927 RPL22P35268 128 aaKnown RBP23.64■■□□□ 1.37
PTX3-201ENST00000295927 TUFMP49411 452 aaKnown RBP23.64■■□□□ 1.37
PTX3-201ENST00000295927 BRMS1LQ5PSV4 323 aa23.64■■□□□ 1.37
PTX3-201ENST00000295927 ZNF461Q8TAF7 563 aa23.64■■□□□ 1.37
PTX3-201ENST00000295927 AAASQ9NRG9 546 aa23.64■■□□□ 1.37
PTX3-201ENST00000295927 TPX2Q9ULW0 747 aaKnown RBP23.64■■□□□ 1.37
PTX3-201ENST00000295927 ABLIM3O94929 683 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 SEC24AO95486 1093 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 URODP06132 367 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 CHKAP35790 457 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 HCAR3P49019 387 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 PMS2P54278 862 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 NRLP54845 237 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 TPI1P60174 286 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 HTRA4P83105 476 aaPredicted RBP23.63■■□□□ 1.37
PTX3-201ENST00000295927 XRCC4Q13426 336 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 VPS52Q8N1B4 723 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 SERPINB11Q96P15 392 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 TLR8Q9NR97 1041 aaKnown RBP23.63■■□□□ 1.37
PTX3-201ENST00000295927 CLIC5Q9NZA1 410 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 OR12D3Q9UGF7 316 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 DCLK1O15075 740 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 SYF2O95926 243 aaKnown RBP23.63■■□□□ 1.37
PTX3-201ENST00000295927 RBL1P28749 1068 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 CCR1P32246 355 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 PPM1AP35813 382 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 SLMAPQ14BN4 828 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 TMEM240Q5SV17 173 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 RASIP1Q5U651 963 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 CCDC25Q86WR0 208 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 LRRN4Q8WUT4 740 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 CXXC1Q9P0U4 656 aaPredicted RBP23.63■■□□□ 1.37
PTX3-201ENST00000295927 PLAAQ9Y263 795 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 PCDHB12Q9Y5F1 795 aa23.63■■□□□ 1.37
PTX3-201ENST00000295927 CFAP69A5D8W1 941 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 KCNN4O15554 427 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 MFSD11O43934 449 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 RARGP13631 454 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 OAS2P29728 719 aaKnown RBP23.62■■□□□ 1.37
PTX3-201ENST00000295927 PSEN1P49768 467 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 PPP2R5DQ14738 602 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 HSP90B2PQ58FF3 399 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 SPDYCQ5MJ68 293 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 TPGS2Q68CL5 300 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 CDKL3Q8IVW4 592 aaPredicted RBP23.62■■□□□ 1.37
PTX3-201ENST00000295927 C7orf61Q8IZ16 206 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 FIBCD1Q8N539 461 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 CCDC33Q8N5R6 958 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 AUTS2Q8WXX7 1259 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 RUFY1Q96T51 708 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 EPAS1Q99814 870 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 OSBPL2Q9H1P3 480 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 PRDM10Q9NQV6 1147 aa23.62■■□□□ 1.37
PTX3-201ENST00000295927 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.62■■□□□ 1.37
PTX3-201ENST00000295927 ERCC2P18074 760 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 DNAJB2P25686 324 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 ZNF135P52742 658 aaPredicted RBP23.61■■□□□ 1.37
PTX3-201ENST00000295927 CBX1P83916 185 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 PAFAH1B3Q15102 231 aaKnown RBP23.61■■□□□ 1.37
PTX3-201ENST00000295927 SLC45A4Q5BKX6 768 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 RNASEH2BQ5TBB1 312 aaKnown RBP23.61■■□□□ 1.37
PTX3-201ENST00000295927 BZW1Q7L1Q6 419 aaKnown RBP23.61■■□□□ 1.37
PTX3-201ENST00000295927 RTP4Q96DX8 246 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 CEP295NLQ96MC4 621 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 PWWP2AQ96N64 755 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 OLFM3Q96PB7 478 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 ZBED2Q9BTP6 218 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 TTLL2Q9BWV7 592 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 MED4Q9NPJ6 270 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 MAGED2Q9UNF1 606 aaPredicted RBP23.61■■□□□ 1.37
PTX3-201ENST00000295927 QKIQ96PU8 341 aaKnown RBP eCLIP23.61■■□□□ 1.37
PTX3-201ENST00000295927 HAPLN3Q96S86 360 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 TSPYL1Q9H0U9 437 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 HSFX1Q9UBD0 423 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 TLR6Q9Y2C9 796 aa23.61■■□□□ 1.37
PTX3-201ENST00000295927 PAGE1O75459 146 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 LRIG2O94898 1065 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 LINC00271P0C7V0 271 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 EFEMP1Q12805 493 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 RAB33AQ14088 237 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 MORF4L2Q15014 288 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 SIK2Q9H0K1 926 aa23.6■■□□□ 1.37
PTX3-201ENST00000295927 EPB41L4BQ9H329 900 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms