RNA–Protein interactions for RNA: ENST00000287543.4

MALSU1-201, Transcript of mitochondrial assembly of ribosomal large subunit 1, humanhuman

TSL 2

Gene MALSU1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALSU1-201ENST00000287543 VPS16Q9H269 839 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 SYNCQ9H7C4 482 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 SEMA4GQ9NTN9 838 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 FANCLQ9NW38 375 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 SLC12A6Q9UHW9 1150 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 CYTH4Q9UIA0 394 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 USP34Q70CQ2 3546 aa19.69■□□□□ 0.74
MALSU1-201ENST00000287543 PTPRZ1P23471 2315 aaPredicted RBP19.69■□□□□ 0.74
MALSU1-201ENST00000287543 MYO15AQ9UKN7 3530 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 HSF2BPO75031 334 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 APOEP02649 317 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 SLC2A3P11169 496 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 CDK11BP21127 795 aaKnown RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 GBP1P32455 592 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 CDK17Q00537 523 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 ARID5AQ03989 594 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 STARD3Q14849 445 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 CCDC117Q8IWD4 279 aaPredicted RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 HMGB4Q8WW32 186 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 SLC39A13Q96H72 371 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 NAA15Q9BXJ9 866 aaKnown RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 TPSD1Q9BZJ3 242 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 DUSP15Q9H1R2 295 aaPredicted RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 ELOVL2Q9NXB9 296 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 THAP10Q9P2Z0 257 aaPredicted RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 AJAP1Q9UKB5 411 aaPredicted RBP19.68■□□□□ 0.74
MALSU1-201ENST00000287543 FHOD1Q9Y613 1164 aa19.68■□□□□ 0.74
MALSU1-201ENST00000287543 TSPAN3O60637 253 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 ZNF217O75362 1048 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 CYP11B1P15538 503 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 HOXD9P28356 352 aaPredicted RBP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 PUM1Q14671 1186 aaKnown RBP eCLIP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 GEN1Q17RS7 908 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 SPDYCQ5MJ68 293 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 PIK3R6Q5UE93 754 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 SYPL2Q5VXT5 272 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 PASD1Q8IV76 773 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 MSANTD4Q8NCY6 345 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 C1orf131Q8NDD1 294 aaKnown RBP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 FCRL2Q96LA5 508 aaPredicted RBP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 CPXM1Q96SM3 734 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 LIMA1Q9UHB6 759 aaKnown RBP19.67■□□□□ 0.74
MALSU1-201ENST00000287543 HCN2Q9UL51 889 aa19.67■□□□□ 0.74
MALSU1-201ENST00000287543 FANCMQ8IYD8 2048 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 A0A1W2PQF6 199 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 LRRC10BA6NIK2 292 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 MAP3K13O43283 966 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 LSM8O95777 96 aaKnown RBP19.66■□□□□ 0.74
MALSU1-201ENST00000287543 TRUB2O95900 331 aaKnown RBP19.66■□□□□ 0.74
MALSU1-201ENST00000287543 P2RY2P41231 377 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 WASP42768 502 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 DCAF6Q58WW2 860 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 OR6B2Q6IFH4 312 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 TAC4Q86UU9 113 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 ZNF677Q86XU0 584 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 HJURPQ8NCD3 748 aaPredicted RBP19.66■□□□□ 0.74
MALSU1-201ENST00000287543 P2RY11Q96G91 374 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 BTN2A3PQ96KV6 586 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 SLC2A13Q96QE2 648 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 ACOX2Q99424 681 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 CIPCQ9C0C6 399 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 ARRDC1-AS1Q9H2J1 176 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 PARD6AQ9NPB6 346 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 ZDHHC4Q9NPG8 344 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 RRN3Q9NYV6 651 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 STON1Q9Y6Q2 735 aa19.66■□□□□ 0.74
MALSU1-201ENST00000287543 F8VZ95 297 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 DCLK1O15075 740 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 SYNCRIPO60506 623 aaKnown RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 IGLV3-25P01717 112 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 ZNF806P0C7X5 589 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 CDH5P33151 784 aaPredicted RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 DPP6P42658 865 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 FOXK2Q01167 660 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 SLC6A3Q01959 620 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 ENPP2Q13822 863 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 FAM133BQ5BKY9 247 aaKnown RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 PMS2CLQ68D20 193 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 SLC36A4Q6YBV0 504 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 PRR23CQ6ZRP0 262 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 LPCAT2Q7L5N7 544 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 SLC26A9Q7LBE3 791 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 ERMP1Q7Z2K6 904 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 AHI1Q8N157 1196 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 ATP6V0D2Q8N8Y2 350 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 C12orf50Q8NA57 414 aaPredicted RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 ZNF397Q8NF99 534 aaPredicted RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 VPS45Q9NRW7 570 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 CACNA2D2Q9NY47 1150 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 DLL3Q9NYJ7 618 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 TJP2Q9UDY2 1190 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 CDV3Q9UKY7 258 aaKnown RBP19.65■□□□□ 0.74
MALSU1-201ENST00000287543 PLA2G4CQ9UP65 541 aa19.65■□□□□ 0.74
MALSU1-201ENST00000287543 RIF1Q5UIP0 2472 aaKnown RBP19.64■□□□□ 0.74
MALSU1-201ENST00000287543 TBL1XO60907 577 aa19.64■□□□□ 0.73
MALSU1-201ENST00000287543 ATP5BP06576 529 aaKnown RBP19.64■□□□□ 0.73
MALSU1-201ENST00000287543 PNMA6AP0CW24 399 aaPredicted RBP19.64■□□□□ 0.73
MALSU1-201ENST00000287543 GABRG2P18507 467 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms