RNA–Protein interactions for RNA: ENST00000277537.10

SEC16A-201, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 3,910 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-201ENST00000277537 SNRPAP09012 282 aaKnown RBP9.27□□□□□ -0.92
SEC16A-201ENST00000277537 ABCG1P45844 678 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 PITX1P78337 314 aaPredicted RBP9.27□□□□□ -0.92
SEC16A-201ENST00000277537 HTRA3P83110 453 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 NOMO1Q15155 1222 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 SLC45A4Q5BKX6 768 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 NOMO2Q5JPE7 1267 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 OLFML1Q6UWY5 402 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 IFNLR1Q8IU57 520 aaPredicted RBP9.27□□□□□ -0.92
SEC16A-201ENST00000277537 RNF135Q8IUD6 432 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 ARMC2Q8NEN0 867 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 USP6NLQ92738 828 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 SGSM3Q96HU1 749 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 TRPC7Q9HCX4 862 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 CHST12Q9NRB3 414 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 MIOSQ9NXC5 875 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 SMG5Q9UPR3 1016 aaKnown RBP9.27□□□□□ -0.92
SEC16A-201ENST00000277537 CITO14578 2027 aa9.27□□□□□ -0.92
SEC16A-201ENST00000277537 A0A1W2PPM1 405 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 BEST1O76090 585 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 MGAT1P26572 445 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 PSMB4P28070 264 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 RPL9P32969 192 aaKnown RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 FAAP100Q0VG06 881 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 BFSP2Q13515 415 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 TCEAL1Q15170 157 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 ANKRD20A2Q5SQ80 823 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 ANKRD20A1Q5TYW2 823 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 TMEM110Q86TL2 294 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 CMASQ8NFW8 434 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 SEPT8Q92599 483 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 KCTD15Q96SI1 283 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 HNRNPABQ99729 332 aaKnown RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 ZNF670Q9BS34 389 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 COLEC11Q9BWP8 271 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 XAB2Q9HCS7 855 aaKnown RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 DDX20Q9UHI6 824 aaKnown RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 VANGL2Q9ULK5 521 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 SLC12A8A0AV02 714 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 ITGBL1O95965 494 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 KLF1Q13351 362 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 NXNQ6DKJ4 435 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 CLEC20AQ6ZU45 233 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 MCUQ8NE86 351 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 PRCCQ92733 491 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 TRIM62Q9BVG3 475 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 SLC4A5Q9BY07 1137 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 TRIM55Q9BYV6 548 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 C12orf65Q9H3J6 166 aaKnown RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 UBN1Q9NPG3 1134 aa9.27□□□□□ -0.93
SEC16A-201ENST00000277537 C20orf96Q9NUD7 363 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 USP15Q9Y4E8 981 aaPredicted RBP9.27□□□□□ -0.93
SEC16A-201ENST00000277537 SDR42E2A6NKP2 422 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 GOLGA8CPA6NN73 597 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 PIRO00625 290 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 PRRG1O14668 218 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 INHAP05111 366 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 POLBP06746 335 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CCR1P32246 355 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CDH5P33151 784 aaPredicted RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 TUBP50607 506 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 NFE2Q16621 373 aaPredicted RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 RNASEH2BQ5TBB1 312 aaKnown RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CYP4X1Q8N118 509 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 RIBC1Q8N443 379 aaPredicted RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 NIPA2Q8N8Q9 360 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 DBF4BQ8NFT6 615 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 SLC35B2Q8TB61 432 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 IL1RAPL1Q9NZN1 696 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 FER1L6Q2WGJ9 1857 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 SMAPO00193 183 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 MDM4O15151 490 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 MFSD11O43934 449 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 SOAT2O75908 522 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 TMEM63AO94886 807 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CHRNA1P02708 482 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 GRK4P32298 578 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 RPA3P35244 121 aaPredicted RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 ADRA1BP35368 520 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 GRIK3Q13003 919 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 ARHGAP17Q68EM7 881 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 ZNF280DQ6N043 979 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 RFX8Q6ZV50 586 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CRYBG2Q8N1P7 616 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 EXT2Q93063 718 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 LRRC37BQ96QE4 947 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 CATSPERBQ9H7T0 1116 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 MFHAS1Q9Y4C4 1052 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 MBLAC1A4D2B0 266 aaPredicted RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 PTGESO14684 152 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 NRP1O14786 923 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 ALOX15BO15296 676 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 RPLP2P05387 115 aaKnown RBP9.26□□□□□ -0.93
SEC16A-201ENST00000277537 KCNE1P15382 129 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 GJA9P57773 515 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 QPCTQ16769 361 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 IL31Q6EBC2 164 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 AGMOQ6ZNB7 445 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 KIRREL3Q8IZU9 778 aa9.26□□□□□ -0.93
SEC16A-201ENST00000277537 BBS5Q8N3I7 341 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms