RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 DQX1Q8TE96 717 aaKnown RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 GABRG3Q99928 467 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 POLMQ9NP87 494 aaPredicted RBP15.04■□□□□ -0
HMGN3-201ENST00000275036 CD93Q9NPY3 652 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 TAB2Q9NYJ8 693 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 STOML2Q9UJZ1 356 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 PCDHGC3Q9UN70 934 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 NAALADL1Q9UQQ1 740 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 SLC27A6Q9Y2P4 619 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 PCDHGA5Q9Y5G8 931 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 FHOD1Q9Y613 1164 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 RAD54BQ9Y620 910 aa15.04■□□□□ -0
HMGN3-201ENST00000275036 MUC22E2RYF6 1773 aaPredicted RBP15.03■□□□□ -0
HMGN3-201ENST00000275036 WASH3PC4AMC7 463 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 TSPAN3O60637 253 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 RHOBTB1O94844 696 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 NCAM1P13591 858 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 HOXB2P14652 356 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 EEF1GP26641 437 aaKnown RBP15.03■□□□□ -0
HMGN3-201ENST00000275036 NTSR1P30989 418 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 ACADSBP45954 432 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 SGSHP51688 502 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 CREB5Q02930 508 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 ELF2Q15723 593 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 KLHDC7AQ5VTJ3 777 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 SYPL2Q5VXT5 272 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 FAM71AQ8IYT1 594 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 ADAM32Q8TC27 787 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 FAM149B1Q96BN6 582 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 CPXM1Q96SM3 734 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 NAA15Q9BXJ9 866 aaKnown RBP15.03■□□□□ -0
HMGN3-201ENST00000275036 SLC6A17Q9H1V8 727 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 CACNA2D2Q9NY47 1150 aa15.03■□□□□ -0
HMGN3-201ENST00000275036 GOLGA6L7A0A1B0GV03 622 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 PATE3B3GLJ2 98 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 GOLGA6L22H0YM25 854 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 PES1O00541 588 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 ALDH1A2O94788 518 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 LATS1O95835 1130 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 SDHBP21912 280 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 HOXD9P28356 352 aaPredicted RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 SLC6A4P31645 630 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 PTGER3P43115 390 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 TBX4P57082 545 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 PITX1P78337 314 aaPredicted RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 DRAP1Q14919 205 aaPredicted RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 KRT31Q15323 416 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 TAF5Q15542 800 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 AASDHQ4L235 1098 aaPredicted RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 FAM133BQ5BKY9 247 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 ADGRF1Q5T601 910 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 TMEM215Q68D42 235 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 NADSYN1Q6IA69 706 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 NUDT18Q6ZVK8 323 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 TRMT11Q7Z4G4 463 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 TAC4Q86UU9 113 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 CHPFQ8IZ52 775 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 C1orf131Q8NDD1 294 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 IPO4Q8TEX9 1081 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 DDI1Q8WTU0 396 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 GOLGA1Q92805 767 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 FCRL2Q96LA5 508 aaPredicted RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 LSM14BQ9BX40 385 aaKnown RBP15.02■□□□□ -0
HMGN3-201ENST00000275036 PLCB1Q9NQ66 1216 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 VPS45Q9NRW7 570 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 FANCLQ9NW38 375 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 CALCOCO1Q9P1Z2 691 aa15.02■□□□□ -0
HMGN3-201ENST00000275036 BCCIPQ9P287 314 aaKnown RBP eCLIP15.02■□□□□ -0
HMGN3-201ENST00000275036 CNOT1A5YKK6 2376 aaKnown RBP15.02□□□□□ -0.01
HMGN3-201ENST00000275036 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 TM4SF5O14894 197 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 SART1O43290 800 aaKnown RBP15.01□□□□□ -0.01
HMGN3-201ENST00000275036 CAVIN2O95810 425 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 CYBBP04839 570 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 UCHL3P15374 230 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 NDUFV2P19404 249 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 KLK7P49862 253 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 PTK2Q05397 1052 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 RING1Q06587 406 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 RAPGEF1Q13905 1077 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 MPPE1Q53F39 396 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 RFWD3Q6PCD5 774 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 BEND5Q7L4P6 421 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 ARMCX6Q7L4S7 300 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 TMEFF1Q8IYR6 380 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 PGBD3Q8N328 593 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 C12orf50Q8NA57 414 aaPredicted RBP15.01□□□□□ -0.01
HMGN3-201ENST00000275036 MYEOVQ96EZ4 313 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 SLC39A13Q96H72 371 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 PPP1R13BQ96KQ4 1090 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 VPS16Q9H269 839 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 LHX5Q9H2C1 402 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 TMEM63CQ9P1W3 806 aa15.01□□□□□ -0.01
HMGN3-201ENST00000275036 ATXN2Q99700 1313 aaKnown RBP15□□□□□ -0.01
HMGN3-201ENST00000275036 LNP1A1A4G5 178 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 ACSL4O60488 711 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 MBD3O95983 291 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 IGLV3-25P01717 112 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 ERBB2P04626 1255 aa15□□□□□ -0.01
HMGN3-201ENST00000275036 IL12RB1P42701 662 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms