RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 LENG8Q96PV6 779 aaPredicted RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 MRPL1Q9BYD6 325 aaKnown RBP13.31□□□□□ -0.28
COL8A1-202ENST00000273342 MFHAS1Q9Y4C4 1052 aa13.31□□□□□ -0.28
COL8A1-202ENST00000273342 CCDC78A2IDD5 438 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 H3BSA7 217 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 CCNT2O60583 730 aaKnown RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SPAG6O75602 509 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 ASNSP08243 561 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 PRKCHP24723 683 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 PPP2R5DQ14738 602 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 XKR3Q5GH77 459 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SNRNP48Q6IEG0 339 aaKnown RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 AMIGO2Q86SJ2 522 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 UBR7Q8N806 425 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF781Q8N8C0 355 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 GSDMBQ8TAX9 411 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 MAPK15Q8TD08 544 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SIGLEC10Q96LC7 697 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 LRGUKQ96M69 825 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 RNF157Q96PX1 679 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 MIS12Q9H081 205 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SDCBP2Q9H190 292 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 RPAP3Q9H6T3 665 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 TMEM165Q9HC07 324 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 AP4B1Q9Y6B7 739 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SF3B1O75533 1304 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 TBC1D12O60347 775 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 DNAJA2O60884 412 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 ERVK-10P10266 1014 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 COX4I1P13073 169 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 ENO3P13929 434 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 TFE3P19532 575 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 TYK2P29597 1187 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 MCCD1P59942 119 aaPredicted RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 PCLAFQ15004 111 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 LCA5Q86VQ0 697 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 C12orf29Q8N999 325 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 PCDH19Q8TAB3 1148 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 AKT1S1Q96B36 256 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 OR52B2Q96RD2 323 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 CDRT15Q96T59 188 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SORT1Q99523 831 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 UNKQ9C0B0 810 aaKnown RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 PORCNQ9H237 461 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SEMA6AQ9H2E6 1030 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 COG4Q9H9E3 785 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 ASNSD1Q9NWL6 643 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 CHCHD3Q9NX63 227 aaKnown RBP13.3□□□□□ -0.28
COL8A1-202ENST00000273342 SLX4Q8IY92 1834 aa13.3□□□□□ -0.28
COL8A1-202ENST00000273342 XPO1O14980 1071 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 MICAL2O94851 1124 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 CRTAMO95727 393 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 EGFRP00533 1210 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 IL1BP01584 269 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 MLH1P40692 756 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PHKA2P46019 1235 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 WDR78Q5VTH9 848 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PGM2L1Q6PCE3 622 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ACTRT2Q8TDY3 377 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 CMTM5Q96DZ9 223 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PRICKLE1Q96MT3 831 aaPredicted RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 EBNA1BP2Q99848 306 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF518BQ9C0D4 1074 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 CAB39LQ9H9S4 337 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 XPNPEP3Q9NQH7 507 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF302Q9NR11 478 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 SEPT10Q9P0V9 454 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 EFR3BQ9Y2G0 817 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 TDRKHQ9Y2W6 561 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 CNTNAP1P78357 1384 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 APOL1O14791 398 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 B4GALT5O43286 388 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PLIN3O60664 434 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 NPM3O75607 178 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ATG7O95352 703 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 RALBP11234 206 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 FGFR3P22607 806 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 DLG2Q15700 870 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 TBCCQ15814 346 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 Q3C1V9 767 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 NXNQ6DKJ4 435 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ABHD15Q6UXT9 468 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 SNX32Q86XE0 403 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 BRSK2Q8IWQ3 736 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 PQLC1Q8N2U9 271 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 RNF149Q8NC42 400 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 GRIN3AQ8TCU5 1115 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 DHX35Q9H5Z1 703 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ZDHHC7Q9NXF8 308 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 ZNF180Q9UJW8 692 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 TBC1D30Q9Y2I9 924 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 STYXL1Q9Y6J8 313 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 HSPA4LO95757 839 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 CXCL8P10145 99 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 XRCC1P18887 633 aaPredicted RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 IL4RP24394 825 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 EPHA3P29320 983 aa13.29□□□□□ -0.28
COL8A1-202ENST00000273342 RPL5P46777 297 aaKnown RBP13.29□□□□□ -0.28
COL8A1-202ENST00000273342 TFDP2Q14188 446 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms