RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 XPO6Q96QU8 1125 aaKnown RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 FRMD8Q9BZ67 464 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 PPANQ9NQ55 473 aaKnown RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 PAK6Q9NQU5 681 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TBK1Q9UHD2 729 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 RABGEF1Q9UJ41 708 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 PITPNM1O00562 1244 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 METTL18O95568 372 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 IGLV3-25P01717 112 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 HCAR3P49019 387 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 SLC5A3P53794 718 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 MTM1Q13496 603 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 EIF4EBP2Q13542 120 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 RASA2Q15283 850 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 SYCP2LQ5T4T6 812 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 HEATR6Q6AI08 1181 aaKnown RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TADA2BQ86TJ2 420 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 IGDCC3Q8IVU1 814 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 AGGF1Q8N302 714 aaeCLIP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 HTR3CQ8WXA8 447 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 FAM193BQ96PV7 902 aaPredicted RBP17.19■□□□□ 0.34
CCDC40-201ENST00000269318 LGMNQ99538 433 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 PPCSQ9HAB8 311 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 FETUBQ9UGM5 382 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 TEX264Q9Y6I9 313 aa17.19■□□□□ 0.34
CCDC40-201ENST00000269318 GMNCA6NCL1 334 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 NDUFAB1O14561 156 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 FAM107AO95990 144 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 TCTN1Q2MV58 587 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 ARL13BQ3SXY8 428 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 SLC39A12Q504Y0 691 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 CRIPAKQ8N1N5 446 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 DQX1Q8TE96 717 aaKnown RBP17.18■□□□□ 0.34
CCDC40-201ENST00000269318 CASD1Q96PB1 797 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 CCT8L2Q96SF2 557 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 TRIM62Q9BVG3 475 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 SLC24A2Q9UI40 661 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 ACTL7BQ9Y614 415 aa17.18■□□□□ 0.34
CCDC40-201ENST00000269318 ZNF638Q14966 1978 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 SYN3O14994 580 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 PHBP35232 272 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 GRIK1P39086 918 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 ELK3P41970 407 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 GLUD2P49448 558 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 C3orf62Q6ZUJ4 267 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 CAND1Q86VP6 1230 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 VPS52Q8N1B4 723 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 MCUQ8NE86 351 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 DHRS4Q9BTZ2 278 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 ACSS3Q9H6R3 686 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 WDCPQ9H6R7 721 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 CHMP2BQ9UQN3 213 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 PCDHB7Q9Y5E2 793 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 NR2E3Q9Y5X4 410 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 A0A0A0MRY4 1105 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 POC1B-GALNT4F8VUJ3 575 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 AVILO75366 819 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TADA2AO75478 443 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 APRTP07741 180 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 ERCC2P18074 760 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TPSB2P20231 275 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 CCT5P48643 541 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 PDK1Q15118 436 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TMED2Q15363 201 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TPSAB1Q15661 275 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 VARS2Q5ST30 1063 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 DCP1BQ8IZD4 617 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 NETO2Q8NC67 525 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 ZNF473Q8WTR7 871 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 SEPT8Q92599 483 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 SPATA13Q96N96 652 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TKTL2Q9H0I9 626 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 CCDC134Q9H6E4 229 aa17.17■□□□□ 0.34
CCDC40-201ENST00000269318 INTS9Q9NV88 658 aaKnown RBP17.17■□□□□ 0.34
CCDC40-201ENST00000269318 TMEM120BA0PK00 339 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 MAGEA3P43357 314 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 PGFP49763 221 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 GATMP50440 423 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ZNF135P52742 658 aaPredicted RBP17.16■□□□□ 0.34
CCDC40-201ENST00000269318 TPI1P60174 286 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 YWHAGP61981 247 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC40-201ENST00000269318 NR1H3Q13133 447 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 SEMA5AQ13591 1074 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 MRPL58Q14197 206 aaKnown RBP17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ANKRD20A2Q5SQ80 823 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ANKRD20A1Q5TYW2 823 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ANKRD20A3Q5VUR7 823 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 FAM43BQ6ZT52 329 aaPredicted RBP17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ZNF534Q76KX8 674 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 SCD5Q86SK9 330 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 TRABD2AQ86V40 505 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 TP53INP2Q8IXH6 220 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 PALM2Q8IXS6 379 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ABI1Q8IZP0 508 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 FBF1Q8TES7 1133 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 FUBP3Q96I24 572 aaKnown RBP eCLIP17.16■□□□□ 0.34
CCDC40-201ENST00000269318 PRDM12Q9H4Q4 367 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 ADAM28Q9UKQ2 775 aa17.16■□□□□ 0.34
CCDC40-201ENST00000269318 VWA8A3KMH1 1905 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms