RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 HEATR6Q6AI08 1181 aaKnown RBP13.33□□□□□ -0.28
CPSF6-201ENST00000266679 CDHR3Q6ZTQ4 885 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 SH2D5Q6ZV89 423 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 ARRDC4Q8NCT1 418 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 AGAP11Q8TF27 550 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 TMPRSS4Q9NRS4 437 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 GDAP2Q9NXN4 497 aa13.33□□□□□ -0.28
CPSF6-201ENST00000266679 A0A0G2JND7 137 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 C2CD2LO14523 706 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 XPOTO43592 962 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 MFSD11O43934 449 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 HUS1O60921 280 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 KRT37O76014 449 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 SNRPAP09012 282 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 TPSB2P20231 275 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 ARL4AP40617 200 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 PNPLA4P41247 253 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 RPL34P49207 117 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 PITX1P78337 314 aaPredicted RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 CBLBQ13191 982 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 TPSAB1Q15661 275 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 TRMT10BQ6PF06 316 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 C4orf22Q6V702 233 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 PIGZQ86VD9 579 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 CHSY1Q86X52 802 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 B3GALNT2Q8NCR0 500 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 UTP4Q969X6 686 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 RAB3IPQ96QF0 476 aaPredicted RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 SRPK1Q96SB4 655 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 LRMDAQ9H2I8 198 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 FLRT1Q9NZU1 646 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 FZD10Q9ULW2 581 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 GNEQ9Y223 722 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 IPPQ9Y573 584 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 USP3Q9Y6I4 520 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 ALPK3Q96L96 1907 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 XPO1O14980 1071 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 ATP5HO75947 161 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 EZRP15311 586 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 KCNE1P15382 129 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 MATKP42679 507 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 MAGEA3P43357 314 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 SERPINB4P48594 390 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 NR2C2P49116 596 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 BEX3Q00994 111 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 PCBP1Q15365 356 aaKnown RBP eCLIP13.32□□□□□ -0.287e-11■□□□□ 8.4
CPSF6-201ENST00000266679 WLSQ5T9L3 541 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 STRADAQ7RTN6 431 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 MTDHQ86UE4 582 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 GSDMBQ8TAX9 411 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 TFB1MQ8WVM0 346 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 LRRC39Q96DD0 335 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 STAMBPL1Q96FJ0 436 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 SIGLEC10Q96LC7 697 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 HSFY1Q96LI6 401 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
CPSF6-201ENST00000266679 ZNF180Q9UJW8 692 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 NUMBLQ9Y6R0 609 aa13.32□□□□□ -0.28
CPSF6-201ENST00000266679 TRIOBPQ9H2D6 2365 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 TRDMT1O14717 391 aaKnown RBP13.31□□□□□ -0.28
CPSF6-201ENST00000266679 DAB1O75553 588 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 RABGGTBP53611 331 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 DCAF6Q58WW2 860 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 EFHC1Q5JVL4 640 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 OTUD1Q5VV17 481 aaPredicted RBP13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ARCQ7LC44 396 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 CCDC91Q7Z6B0 441 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ZNF398Q8TD17 642 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 DEPDC1BQ8WUY9 529 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 TNIP3Q96KP6 325 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 LGMNQ99538 433 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 MECRQ9BV79 373 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 TRIM55Q9BYV6 548 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 DNAI2Q9GZS0 605 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 CACNG4Q9UBN1 327 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 L3MBTL1Q9Y468 752 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 PCDHA11Q9Y5I1 949 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 CCDC195A0A1B0GUA6 201 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 BEST1O76090 585 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 T-ENOLP0DO92 83 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 CYP2B6P20813 491 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 WARSP23381 471 aaKnown RBP13.31□□□□□ -0.28
CPSF6-201ENST00000266679 SEMA5AQ13591 1074 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 PRKD1Q15139 912 aaPredicted RBP13.31□□□□□ -0.28
CPSF6-201ENST00000266679 NBPF20Q3BBV1 942 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 SLC25A52Q3SY17 297 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ANKRD20A2Q5SQ80 823 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ANKRD20A1Q5TYW2 823 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ANKRD20A3Q5VUR7 823 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 SMG8Q8ND04 991 aaKnown RBP13.31□□□□□ -0.28
CPSF6-201ENST00000266679 HTR3CQ8WXA8 447 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 OLFM3Q96PB7 478 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 DEFB118Q96PH6 123 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 TMEM120AQ9BXJ8 343 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 SLC13A1Q9BZW2 595 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 ARHGEF4Q9NR80 690 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 PCMTD2Q9NV79 361 aa13.31□□□□□ -0.28
CPSF6-201ENST00000266679 PIH1D1Q9NWS0 290 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms