RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 MCOLN2Q8IZK6 566 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 CFAP52Q8N1V2 620 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 DDI1Q8WTU0 396 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 RXFP2Q8WXD0 754 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 PLD4Q96BZ4 506 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 PRICKLE1Q96MT3 831 aaPredicted RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 SELENOOQ9BVL4 669 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 PACSIN1Q9BY11 444 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 EDEM3Q9BZQ6 932 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 SIK2Q9H0K1 926 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 DEF6Q9H4E7 631 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 DNAJC17Q9NVM6 304 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 STIM2Q9P246 746 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 TBC1D14Q9P2M4 693 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 HBS1LQ9Y450 684 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 GVINP1Q7Z2Y8 2422 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 RNF40O75150 1001 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 TULP3O75386 442 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 ADCY5O95622 1261 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 APOEP02649 317 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 CALB1P05937 261 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 KRT3P12035 628 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 PDGFRAP16234 1089 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 GALK1P51570 392 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 IRAK1P51617 712 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 SNX16P57768 344 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 STARD6P59095 220 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 RPS24P62847 133 aaKnown RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 PRKCQQ04759 706 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 C2orf27AQ580R0 203 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 NUGGCQ68CJ6 796 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 ASTLQ6HA08 431 aaPredicted RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 ACAD10Q6JQN1 1059 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 FSTL4Q6MZW2 842 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 RALGPS2Q86X27 583 aaPredicted RBP7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 OR8K1Q8NGG5 319 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 WFDC5Q8TCV5 224 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 SHDQ96IW2 340 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 DNAJC7Q99615 494 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 P2RY13Q9BPV8 354 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 MAGEB5Q9BZ81 275 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 TMEM59LQ9UK28 342 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 TLR6Q9Y2C9 796 aa7.53□□□□□ -1.2
DEPDC1B-201ENST00000265036 FAM186AA6NE01 2351 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 AKR1B15C9JRZ8 316 aaPredicted RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 IGLV3-25P01717 112 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 IGLV3-27P01718 113 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 SDC4P31431 198 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 NOS2P35228 1153 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 OGDHQ02218 1023 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 DEUP1Q05D60 604 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 NR1H3Q13133 447 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TRIM14Q14142 442 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 GAS6Q14393 721 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 PIK3R6Q5UE93 754 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 DCUN1D2Q6PH85 259 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TSSK4Q6SA08 328 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZDHHC17Q8IUH5 632 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ZNF276Q8N554 614 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TC2NQ8N9U0 490 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 C3orf20Q8ND61 904 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CD101Q93033 1021 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ARHGEF26Q96DR7 871 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 SLC39A13Q96H72 371 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 BTBD6Q96KE9 485 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 NPY6RQ99463 290 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 DDX23Q9BUQ8 820 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TKTL2Q9H0I9 626 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 THAP2Q9H0W7 228 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 LMAN1LQ9HAT1 526 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TRPV5Q9NQA5 729 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ARHGEF4Q9NR80 690 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CNOT8Q9UFF9 292 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 VANGL2Q9ULK5 521 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 STAP1Q9ULZ2 295 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TFR2Q9UP52 801 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 C2CD4BA6NLJ0 364 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CCP110O43303 1012 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 AKR1B10O60218 316 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ACSL4O60488 711 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 GLI1P08151 1106 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 HOXD9P28356 352 aaPredicted RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 AVPR2P30518 371 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 WASP42768 502 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 C1QBPQ07021 282 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 MTAPQ13126 283 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TBX2Q13207 712 aaPredicted RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CCINQ13939 588 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CCDC14Q49A88 953 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CCDC122Q5T0U0 273 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ADGRF1Q5T601 910 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 EMC10Q5UCC4 262 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 FYB2Q5VWT5 728 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 ALKBH5Q6P6C2 394 aaKnown RBP7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 VPS36Q86VN1 386 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 CNGA4Q8IV77 575 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 LGI2Q8N0V4 545 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 FAM172AQ8WUF8 416 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 MRFAP1L1Q96HT8 127 aa7.52□□□□□ -1.21
DEPDC1B-201ENST00000265036 TRIM62Q9BVG3 475 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms