RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 SLC30A4O14863 429 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 NPC1O15118 1278 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 ZBTB24O43167 697 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 PAPSS1O43252 624 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 MAP3K13O43283 966 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 TIMM44O43615 452 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 CAVIN2O95810 425 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 PRKCSHP14314 528 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 HOXD9P28356 352 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 NUGGCQ68CJ6 796 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 KIAA1211LQ6NV74 962 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 DPY19L2P1Q6NXN4 242 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 ANKS1BQ7Z6G8 1248 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 WDTC1Q8N5D0 677 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 C12orf50Q8NA57 414 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 UCMAQ8WVF2 138 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 FAM149B1Q96BN6 582 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 SPACA7Q96KW9 195 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 IRX2Q9BZI1 471 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 SMOC1Q9H4F8 434 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 SAMSN1Q9NSI8 373 aaKnown RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 ELOVL2Q9NXB9 296 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 THAP10Q9P2Z0 257 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 MBD1Q9UIS9 605 aaPredicted RBP16.74■□□□□ 0.27
USE1-201ENST00000263897 STON1Q9Y6Q2 735 aa16.74■□□□□ 0.27
USE1-201ENST00000263897 PLXND1Q9Y4D7 1925 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 E5RJQ4 531 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 ACSL4O60488 711 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 SLC11A2P49281 568 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 DHPSP49366 369 aaPredicted RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 YWHAZP63104 245 aaKnown RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 PTK2Q05397 1052 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 ENPP2Q13822 863 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 EIF4HQ15056 248 aaKnown RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 E2F5Q15329 346 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 AASDHQ4L235 1098 aaPredicted RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 SYPL2Q5VXT5 272 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 TMEM215Q68D42 235 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 LPCAT2Q7L5N7 544 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 DQX1Q8TE96 717 aaKnown RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 GBP4Q96PP9 640 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 TRIM62Q9BVG3 475 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 LHX5Q9H2C1 402 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 AJAP1Q9UKB5 411 aaPredicted RBP16.73■□□□□ 0.27
USE1-201ENST00000263897 PCDHGC3Q9UN70 934 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 TLR6Q9Y2C9 796 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 RAD54BQ9Y620 910 aa16.73■□□□□ 0.27
USE1-201ENST00000263897 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 GOLGA6L7A0A1B0GV03 622 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 DCDC2BA2VCK2 349 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 KCNJ18B7U540 433 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 CAPN9O14815 690 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 CLCN1P35523 988 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 KCNMA1Q12791 1236 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 PDCLQ13371 301 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 NNTQ13423 1086 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 KCNJ12Q14500 433 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 FAM133BQ5BKY9 247 aaKnown RBP16.72■□□□□ 0.27
USE1-201ENST00000263897 SPDYCQ5MJ68 293 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 MPP7Q5T2T1 576 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 PIK3R6Q5UE93 754 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 RFWD3Q6PCD5 774 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 TMEFF1Q8IYR6 380 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 ENOX1Q8TC92 643 aaKnown RBP16.72■□□□□ 0.27
USE1-201ENST00000263897 GPT2Q8TD30 523 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 ERLEC1Q96DZ1 483 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 SLC39A13Q96H72 371 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 FCRL2Q96LA5 508 aaPredicted RBP16.72■□□□□ 0.27
USE1-201ENST00000263897 SERPINB11Q96P15 392 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 POPDC2Q9HBU9 364 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 RXFP3Q9NSD7 469 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 CALCOCO1Q9P1Z2 691 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 NCOR2Q9Y618 2525 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 PI4KAP42356 2102 aa16.72■□□□□ 0.27
USE1-201ENST00000263897 IRAK2O43187 625 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 ZNF217O75362 1048 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 NDUFV2P19404 249 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 EEF1GP26641 437 aaKnown RBP16.71■□□□□ 0.27
USE1-201ENST00000263897 HLA-FP30511 346 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 SLC6A4P31645 630 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 IL12RB1P42701 662 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 SGSHP51688 502 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 LIMK1P53667 647 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 ZNF234Q14588 700 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 TCP11X2Q5H9J9 407 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 RNF43Q68DV7 783 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 NADSYN1Q6IA69 706 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 RBM43Q6ZSC3 357 aaKnown RBP16.71■□□□□ 0.27
USE1-201ENST00000263897 KIAA0907Q7Z7F0 614 aaPredicted RBP16.71■□□□□ 0.27
USE1-201ENST00000263897 FAM71AQ8IYT1 594 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 ADAM32Q8TC27 787 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 PPP1R13BQ96KQ4 1090 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 MRGPRX1Q96LB2 322 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 DDX50Q9BQ39 737 aaKnown RBP16.71■□□□□ 0.27
USE1-201ENST00000263897 CIPCQ9C0C6 399 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 TJP2Q9UDY2 1190 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 NFE2L3Q9Y4A8 694 aa16.71■□□□□ 0.27
USE1-201ENST00000263897 CEP192Q8TEP8 1941 aa16.7■□□□□ 0.26
USE1-201ENST00000263897 MED19A0JLT2 244 aaPredicted RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms