RNA–Protein interactions for RNA: ENST00000262067.4

TSPAN13-201, Transcript of tetraspanin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN13, Length 2,093 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN13-201ENST00000262067 ATXN2LQ8WWM7 1075 aaKnown RBP24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 RABGEF1Q9UJ41 708 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 HACD1B0YJ81 288 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 TADA2AO75478 443 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 ELK3P41970 407 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 MAGEA6P43360 314 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 CXCR3P49682 368 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 IFRD2Q12894 506 aaPredicted RBP24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 TMED2Q15363 201 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 VSTM1Q6UX27 236 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 C4orf22Q6V702 233 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 PPP1R21Q6ZMI0 780 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 TAC4Q86UU9 113 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 TDRPQ86YL5 185 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 HTR3CQ8WXA8 447 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 ZCWPW1Q9H0M4 648 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 WDCPQ9H6R7 721 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 CHMP2BQ9UQN3 213 aa24.82■■□□□ 1.56
TSPAN13-201ENST00000262067 TNFRSF10BO14763 440 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 DCLK1O15075 740 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 APRTP07741 180 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 PHBP35232 272 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 GATMP50440 423 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 SLC5A3P53794 718 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 PAFAH1B3Q15102 231 aaKnown RBP24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 ARL13BQ3SXY8 428 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 ELAC1Q9H777 363 aaKnown RBP24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 INTS9Q9NV88 658 aaKnown RBP24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 PCDHB7Q9Y5E2 793 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 NLRC5Q86WI3 1866 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 TCTN1Q2MV58 587 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 TADA2BQ86TJ2 420 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 AGGF1Q8N302 714 aaeCLIP24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 DQX1Q8TE96 717 aaKnown RBP24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 SEZ6LQ9BYH1 1024 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 TKTL2Q9H0I9 626 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 TEX264Q9Y6I9 313 aa24.81■■□□□ 1.56
TSPAN13-201ENST00000262067 FAM107AO95990 144 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 ERCC2P18074 760 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 TP53INP2Q8IXH6 220 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 SRRM1Q8IYB3 904 aaKnown RBP24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 ABI1Q8IZP0 508 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 VPS52Q8N1B4 723 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 FBF1Q8TES7 1133 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 ZNF473Q8WTR7 871 aaKnown RBP24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 MRRFQ96E11 262 aaKnown RBP24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 CASD1Q96PB1 797 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 FAM107BQ9H098 131 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 ABI2Q9NYB9 513 aaPredicted RBP24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 SNX10Q9Y5X0 201 aa24.8■■□□□ 1.56
TSPAN13-201ENST00000262067 SF3B1O75533 1304 aaKnown RBP eCLIP24.8■■□□□ 1.563e-6■■■■■ 137.9
TSPAN13-201ENST00000262067 TMEM120BA0PK00 339 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 BRAFP15056 766 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 PGFP49763 221 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 TPI1P60174 286 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 EFTUD2Q15029 972 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 PRKD1Q15139 912 aaPredicted RBP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 ARHGEF18Q6ZSZ5 1173 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 CAND1Q86VP6 1230 aaKnown RBP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 SCN4BQ8IWT1 228 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 DCP1BQ8IZD4 617 aaKnown RBP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 DEFB118Q96PH6 123 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 KCNK9Q9NPC2 374 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 TSHRP16473 764 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 HCAR3P49019 387 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 YWHAGP61981 247 aaKnown RBP eCLIP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 AP1B1Q10567 949 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 CBLBQ13191 982 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 ANKRD20A2Q5SQ80 823 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 ANKRD20A1Q5TYW2 823 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 ANKRD20A3Q5VUR7 823 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 FRMD8Q9BZ67 464 aaPredicted RBP24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 PRDM12Q9H4Q4 367 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 SAGE1Q9NXZ1 904 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 SLC24A2Q9UI40 661 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 PTPRDP23468 1912 aa24.79■■□□□ 1.56
TSPAN13-201ENST00000262067 COL4A4P53420 1690 aaPredicted RBP24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 PIAS1O75925 651 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 GEMIN4P57678 1058 aaKnown RBP24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 MPP2Q14168 576 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 PDK1Q15118 436 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 MTFR1Q15390 333 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 VARS2Q5ST30 1063 aaKnown RBP24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 BEND5Q7L4P6 421 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 SEPT8Q92599 483 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 P2RY11Q96G91 374 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 ACSS3Q9H6R3 686 aa24.78■■□□□ 1.56
TSPAN13-201ENST00000262067 A0A0A0MRY4 1105 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 RASA4BC9J798 803 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 RASA4O43374 803 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 PQBP1O60828 265 aaKnown RBP24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 CEP57Q86XR8 500 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 CCNYQ8ND76 341 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 MCUQ8NE86 351 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 SPATA13Q96N96 652 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 PRMT1Q99873 361 aaKnown RBP24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 TRIM62Q9BVG3 475 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 PPCSQ9HAB8 311 aa24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 PAK6Q9NQU5 681 aaPredicted RBP24.77■■□□□ 1.56
TSPAN13-201ENST00000262067 HCSTQ9UBK5 93 aa24.77■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms