RNA–Protein interactions for RNA: ENST00000261789.8

TM9SF1-201, Transcript of transmembrane 9 superfamily member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-201ENST00000261789 CYP2C8P10632 490 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 PITX1P78337 314 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 STX3Q13277 289 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 TTLL12Q14166 644 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 TSNAXIP1Q2TAA8 658 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 FASTKD1Q53R41 847 aaKnown RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 TP53INP2Q8IXH6 220 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 GPC2Q8N158 579 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 LRRC39Q96DD0 335 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 ANKRD27Q96NW4 1050 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 THTPAQ9BU02 230 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 MOCS1Q9NZB8 636 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 CORO1CQ9ULV4 474 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 POU5F1BQ06416 359 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SLC34A1Q06495 639 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 TAPT1Q6NXT6 567 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 MAMDC4Q6UXC1 1216 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 LRRC74BQ6ZQY2 392 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 IFNLR1Q8IU57 520 aaPredicted RBP16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SLC25A41Q8N5S1 370 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 PPP1R14CQ8TAE6 165 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 ZNF778Q96MU6 729 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SYT15Q9BQS2 421 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 C16orf70Q9BSU1 422 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 WWP1Q9H0M0 922 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 CDHR5Q9HBB8 845 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 SEPT10Q9P0V9 454 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 EMCNQ9ULC0 261 aa16.88■□□□□ 0.29
TM9SF1-201ENST00000261789 TPP1O14773 563 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 ACADSP16219 412 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 AKAP5P24588 427 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 MGAT1P26572 445 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 CCNHP51946 323 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 CBLBQ13191 982 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 PPM1JQ5JR12 505 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 MARCH8Q5T0T0 291 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 COLGALT1Q8NBJ5 622 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 USP6NLQ92738 828 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 MTBPQ96DY7 904 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 QKIQ96PU8 341 aaKnown RBP eCLIP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 C11orf84Q9BUA3 381 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 CCDC106Q9BWC9 280 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 YIPF3Q9GZM5 350 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 FAM49AQ9H0Q0 323 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 SPDYE5A6NIY4 337 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 H3BRB1 525 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 TPSB2P20231 275 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 HOXA11P31270 313 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 GCKP35557 465 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 GTF2A2P52657 109 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 AP1B1Q10567 949 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 STILQ15468 1287 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 TPSAB1Q15661 275 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 N4BP2L1Q5TBK1 243 aaPredicted RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 ERO1BQ86YB8 467 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 TMPRSS6Q8IU80 811 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 TRIM42Q8IWZ5 723 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 LMNTD2Q8IXW0 634 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 KBTBD2Q8IY47 623 aa16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 TUT1Q9H6E5 874 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 XAB2Q9HCS7 855 aaKnown RBP16.87■□□□□ 0.29
TM9SF1-201ENST00000261789 DICER1Q9UPY3 1922 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 MAP3K13O43283 966 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 MFSD11O43934 449 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 STAU1O95793 577 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 GRM5P41594 1212 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 MXRA7P84157 204 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 SEMA5AQ13591 1074 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 LAMC2Q13753 1193 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 PDE1CQ14123 709 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 TFB1MQ8WVM0 346 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 DCPSQ96C86 337 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 PANX3Q96QZ0 392 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 SHCBP1LQ9BZQ2 653 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 MMADHCQ9H3L0 296 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 KLK14Q9P0G3 267 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 DNAJC16Q9Y2G8 782 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 LIN7AO14910 233 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 DESP17661 470 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 IREB2P48200 963 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 TMEM154Q6P9G4 183 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 SCUBE1Q8IWY4 988 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 POU5F2Q8N7G0 328 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 SLC2A14Q8TDB8 520 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 CENPIQ92674 756 aaPredicted RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 FAM149B1Q96BN6 582 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 ATXN7L3BQ96GX2 97 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 NXF3Q9H4D5 531 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 GOLGA2P5Q9HBQ8 144 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 ZNF358Q9NW07 568 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 MKS1Q9NXB0 559 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 STX18Q9P2W9 335 aaKnown RBP16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 TAGLN3Q9UI15 199 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 PLA2G4CQ9UP65 541 aa16.86■□□□□ 0.29
TM9SF1-201ENST00000261789 SPTLC1O15269 473 aa16.85■□□□□ 0.29
TM9SF1-201ENST00000261789 ERVK-10P10266 1014 aa16.85■□□□□ 0.29
TM9SF1-201ENST00000261789 PTPN9P43378 593 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms