RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 GAD2Q05329 585 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 NNTQ13423 1086 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 FAM102AQ5T9C2 384 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-201ENST00000260130 ZNF571Q7Z3V5 609 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-201ENST00000260130 TAC4Q86UU9 113 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 PHF13Q86YI8 300 aaPredicted RBP17.44■□□□□ 0.38
SDCBP-201ENST00000260130 UNC45BQ8IWX7 931 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 EXOC4Q96A65 974 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 C11orf70Q9BRQ4 267 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 TLR6Q9Y2C9 796 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 ZDBF2Q9HCK1 2354 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 F5P12259 2224 aa17.44■□□□□ 0.38
SDCBP-201ENST00000260130 DAB1O75553 588 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 IGLV3-27P01718 113 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 NOS2P35228 1153 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 CHKAP35790 457 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 GALK1P51570 392 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 CDK17Q00537 523 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 FZD5Q13467 585 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 GAB4Q2WGN9 574 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 NUGGCQ68CJ6 796 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 P2RY13Q9BPV8 354 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 ADAM22Q9P0K1 906 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 BZW2Q9Y6E2 419 aaKnown RBP17.43■□□□□ 0.38
SDCBP-201ENST00000260130 CCDC66A2RUB6 948 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 GOLGA8SH3BPF8 625 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 IGLV3-25P01717 112 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 MATKP42679 507 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 PTP4A2Q12974 167 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 TRIM14Q14142 442 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 ANO4Q32M45 955 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 TMEM196Q5HYL7 178 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 OLIG1Q8TAK6 271 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 CLDN23Q96B33 292 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 SLC39A13Q96H72 371 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 LMAN1LQ9HAT1 526 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 FBRSL1Q9HCM7 1045 aaKnown RBP17.43■□□□□ 0.38
SDCBP-201ENST00000260130 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.43■□□□□ 0.38
SDCBP-201ENST00000260130 DLGAP2Q9P1A6 1054 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 WDR35Q9P2L0 1181 aa17.43■□□□□ 0.38
SDCBP-201ENST00000260130 HOXC11O43248 304 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 CALB1P05937 261 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 CHRNB1P11230 501 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 PITX1P78337 314 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 GRSF1Q12849 480 aaKnown RBP eCLIP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 EIF4EBP2Q13542 120 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 NAIF1Q69YI7 327 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 ACAD10Q6JQN1 1059 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 TPGS1Q6ZTW0 290 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 CNGA4Q8IV77 575 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 CD101Q93033 1021 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 FCRL2Q96LA5 508 aaPredicted RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 DESI2Q9BSY9 194 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 RRN3Q9NYV6 651 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 IRAK2O43187 625 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 LATS1O95835 1130 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 GBP1P32455 592 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 OPRD1P41143 372 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 RPS9P46781 194 aaKnown RBP17.42■□□□□ 0.38
SDCBP-201ENST00000260130 TUBB2AQ13885 445 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 HGSNATQ68CP4 663 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 PPP1R2P3Q6NXS1 205 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 ARCQ7LC44 396 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 CPXM2Q8N436 756 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 AZIN2Q96A70 460 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 TUBB2BQ9BVA1 445 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 FAM204AQ9H8W3 233 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 STOML2Q9UJZ1 356 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 TMEM59LQ9UK28 342 aa17.42■□□□□ 0.38
SDCBP-201ENST00000260130 SOWAHDA6NJG2 315 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 SERPING1P05155 500 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 C1QBPQ07021 282 aaKnown RBP17.41■□□□□ 0.38
SDCBP-201ENST00000260130 TDRD12Q587J7 1177 aaKnown RBP17.41■□□□□ 0.38
SDCBP-201ENST00000260130 DGKKQ5KSL6 1271 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 TEX35Q5T0J7 233 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 MON1BQ7L1V2 547 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 PHLDB2Q86SQ0 1253 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 FAM217AQ8IXS0 508 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 BBS2Q9BXC9 721 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 DDIT4Q9NX09 232 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 MARK1Q9P0L2 795 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 ADGRG1Q9Y653 693 aa17.41■□□□□ 0.38
SDCBP-201ENST00000260130 KIF5CO60282 957 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 MFAP3LO75121 409 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 GZMAP12544 262 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 DRD1P21728 446 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 EIF2DP41214 584 aaKnown RBP17.4■□□□□ 0.38
SDCBP-201ENST00000260130 MAGEA9P43362 315 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 SLC6A11P48066 632 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 SLC11A2P49281 568 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 NUBP1P53384 320 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 CCINQ13939 588 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 LRRC32Q14392 662 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 ADGRF1Q5T601 910 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 FSTL4Q6MZW2 842 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 NAT16Q8N8M0 369 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 NPY6RQ99463 290 aa17.4■□□□□ 0.38
SDCBP-201ENST00000260130 METTL5Q9NRN9 209 aaKnown RBP17.4■□□□□ 0.38
SDCBP-201ENST00000260130 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.4■□□□□ 0.38
SDCBP-201ENST00000260130 TAS2R14Q9NYV8 317 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms