RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 FOXC1Q12948 553 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 ADAM9Q13443 819 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 UAP1L1Q3KQV9 507 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 RABEPKQ7Z6M1 372 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 TTC39CQ8N584 583 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 FBXL13Q8NEE6 735 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 ZNF419Q96HQ0 510 aaPredicted RBP10.82□□□□□ -0.68
VPS50-201ENST00000251739 HSPA12BQ96MM6 686 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 CDK5RAP1Q96SZ6 601 aaKnown RBP10.82□□□□□ -0.68
VPS50-201ENST00000251739 SCNM1Q9BWG6 230 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 SLC6A17Q9H1V8 727 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 CISHQ9NSE2 258 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 PLK2Q9NYY3 685 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 USP36Q9P275 1121 aaKnown RBP10.82□□□□□ -0.68
VPS50-201ENST00000251739 THAP10Q9P2Z0 257 aaPredicted RBP10.82□□□□□ -0.68
VPS50-201ENST00000251739 CYP8B1Q9UNU6 501 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 ZNF510Q9Y2H8 683 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 COQ4Q9Y3A0 265 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 NFE2L3Q9Y4A8 694 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 RAD54BQ9Y620 910 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 PTPRBP23467 1997 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 TMEM131Q92545 1883 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 IGSF10Q6WRI0 2623 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 PLXNB3Q9ULL4 1909 aa10.82□□□□□ -0.68
VPS50-201ENST00000251739 NPC1O15118 1278 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 S1PR4O95977 384 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 IGLV3-19P01714 112 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 CFIP05156 583 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 RALAP11233 206 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 CD59P13987 128 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 SPINK2P20155 84 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 CORO1AP31146 461 aaKnown RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 COG7P83436 770 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 GFPT1Q06210 699 aaPredicted RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 GEN1Q17RS7 908 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 FUT11Q495W5 492 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 PM20D1Q6GTS8 502 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 TADA2BQ86TJ2 420 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 PIGZQ86VD9 579 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 SMYD4Q8IYR2 804 aaPredicted RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 CPXM2Q8N436 756 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 MINDY1Q8N5J2 469 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 DEFB119Q8N690 84 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 UBR7Q8N806 425 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 TRIML1Q8N9V2 468 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 CCDC47Q96A33 483 aaKnown RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 TMEM176AQ96HP8 235 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 DCLK3Q9C098 648 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 MKRN2Q9H000 416 aaKnown RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 FSCN3Q9NQT6 498 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 DNAAF2Q9NVR5 837 aaKnown RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 AGO1Q9UL18 857 aaKnown RBP10.81□□□□□ -0.68
VPS50-201ENST00000251739 CLEC4EQ9ULY5 219 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 NEUROG3Q9Y4Z2 214 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 STON1Q9Y6Q2 735 aa10.81□□□□□ -0.68
VPS50-201ENST00000251739 TMEM8BA6NDV4 472 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 TULP2O00295 520 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 ZNF202O95125 648 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 CHKAP35790 457 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 IL12RB1P42701 662 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 MMP16P51512 607 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 ZNF132P52740 706 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 FAM193AP78312 1265 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 EFEMP1Q12805 493 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 EIF4HQ15056 248 aaKnown RBP10.8□□□□□ -0.68
VPS50-201ENST00000251739 TRIP4Q15650 581 aaPredicted RBP10.8□□□□□ -0.68
VPS50-201ENST00000251739 CBWD6Q4V339 395 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 ZNF394Q53GI3 561 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 COBLL1Q53SF7 1204 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 CBWD3Q5JTY5 395 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 CBWD5Q5RIA9 395 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 SDE2Q6IQ49 451 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 ARHGAP18Q8N392 663 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 ANKRD52Q8NB46 1076 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 CCDC150Q8NCX0 1101 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 OR2I1PQ8NGU4 316 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 DNASE2BQ8WZ79 361 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 BHMTQ93088 406 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 EEF2KMTQ96G04 330 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 DNAI2Q9GZS0 605 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 SCAND2PQ9GZW5 306 aaPredicted RBP10.8□□□□□ -0.68
VPS50-201ENST00000251739 SLC32A1Q9H598 525 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 MMRN2Q9H8L6 949 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 RAB20Q9NX57 234 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 WSB2Q9NYS7 404 aaPredicted RBP10.8□□□□□ -0.68
VPS50-201ENST00000251739 MARCH2Q9P0N8 246 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 RASAL2Q9UJF2 1139 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 STOML2Q9UJZ1 356 aa10.8□□□□□ -0.68
VPS50-201ENST00000251739 GOLGA4Q13439 2230 aaKnown RBP10.79□□□□□ -0.68
VPS50-201ENST00000251739 SPAARA0A1B0GVQ0 90 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 FAM221BA6H8Z2 402 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 KCNJ18B7U540 433 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 SLC16A3O15427 465 aaKnown RBP10.79□□□□□ -0.68
VPS50-201ENST00000251739 STX10O60499 249 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 OPHN1O60890 802 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 ZBED1O96006 694 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 HOXD9P28356 352 aaPredicted RBP10.79□□□□□ -0.68
VPS50-201ENST00000251739 CD6P30203 668 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 GGCXP38435 758 aa10.79□□□□□ -0.68
VPS50-201ENST00000251739 TKTL1P51854 596 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms