RNA–Protein interactions for RNA: ENST00000249440.4

HOXD3-201, Transcript of homeobox D3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD3, Length 2,303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD3-201ENST00000249440 DBN1Q16643 649 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 STXBP5Q5T5C0 1151 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 C9orf57Q5W0N0 161 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CASC4Q6P4E1 433 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 DENND5BQ6ZUT9 1274 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CATSPER4Q7RTX7 472 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CRYBG2Q8N1P7 616 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 C18orf25Q96B23 403 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 SPATA13Q96N96 652 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 RCOR3Q9P2K3 495 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 PPARGC1AQ9UBK2 798 aaKnown RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 SDR42E2A6NKP2 422 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CAPN14A8MX76 684 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 DGKIO75912 1065 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 PDGFRBP09619 1106 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CCDC130P13994 396 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 GOT1P17174 413 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 GCKP35557 465 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 GNL1P36915 607 aaPredicted RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 STX3Q13277 289 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 KPNB1Q14974 876 aaKnown RBP16.93■□□□□ 0.3
HOXD3-201ENST00000249440 ACSBG2Q5FVE4 666 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 EFHC1Q5JVL4 640 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 GLRA4Q5JXX5 417 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 FBXO47Q5MNV8 452 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 TRIM68Q6AZZ1 485 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 CCNJLQ8IV13 435 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 GPRC5AQ8NFJ5 357 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 STMN2Q93045 179 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 HSFY1Q96LI6 401 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 OLFM3Q96PB7 478 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 FERMT1Q9BQL6 677 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 PRDM16Q9HAZ2 1276 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 THAP1Q9NVV9 213 aa16.93■□□□□ 0.3
HOXD3-201ENST00000249440 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 B2RBV5 119 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 STK10O94804 968 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 KITP10721 976 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 PGM1P36871 562 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 TBCCQ15814 346 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 HSF5Q4G112 596 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 CES4AQ5XG92 561 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 STEAP4Q687X5 459 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 NOTUMQ6P988 496 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 LRRC8BQ6P9F7 803 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 MARK2Q7KZI7 788 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ADGRF2Q8IZF7 708 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ACMSDQ8TDX5 336 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 DNAJC9Q8WXX5 260 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ATP2A3Q93084 1043 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 EIF2AQ9BY44 585 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 UBQLN1Q9UMX0 589 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 HES2Q9Y543 173 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 USP3Q9Y6I4 520 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 CEP350Q5VT06 3117 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 WDR27A2RRH5 827 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ACADSP16219 412 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 VHLP40337 213 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 MATKP42679 507 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 CDC42EP1Q00587 391 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 WASHC5Q12768 1159 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 RCN1Q15293 331 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 MUM1Q2TAK8 710 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ALKAL1Q6UXT8 129 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 PSTKQ8IV42 348 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 LMNTD2Q8IXW0 634 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 COLGALT1Q8NBJ5 622 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 PPP1R14CQ8TAE6 165 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 GTF3C2Q8WUA4 911 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 SIKE1Q9BRV8 207 aa16.92■□□□□ 0.3
HOXD3-201ENST00000249440 TRIM6Q9C030 488 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 ZNF395Q9H8N7 513 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 MARCOQ9UEW3 520 aaPredicted RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 HBS1LQ9Y450 684 aaKnown RBP16.92■□□□□ 0.3
HOXD3-201ENST00000249440 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.91■□□□□ 0.3
HOXD3-201ENST00000249440 H3BRJ5 948 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 HCRTO43612 131 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 MAGEC1O60732 1142 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 ENO1P06733 434 aaKnown RBP16.91■□□□□ 0.3
HOXD3-201ENST00000249440 VAV1P15498 845 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 CDC25CP30307 473 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 TMEM62Q0P6H9 643 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 KBTBD7Q8WVZ9 684 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 RILPQ96NA2 401 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 LGMNQ99538 433 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 C20orf27Q9GZN8 174 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 ADAMTS10Q9H324 1103 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 SNX25Q9H3E2 840 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 EIF2B3Q9NR50 452 aaKnown RBP16.91■□□□□ 0.3
HOXD3-201ENST00000249440 ARHGEF4Q9NR80 690 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 FZD10Q9ULW2 581 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 PLXNB2O15031 1838 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 DCAF8L1A6NGE4 600 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 KPNA7A9QM74 516 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 OPHN1O60890 802 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 PSMG1O95456 288 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 CD4P01730 458 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 LMO2P25791 158 aa16.91■□□□□ 0.3
HOXD3-201ENST00000249440 RAP1GDS1P52306 607 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms