RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 ZNF557Q8N988 423 aaPredicted RBP13.29□□□□□ -0.28
VPREB3-201ENST00000248948 SLC39A13Q96H72 371 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 DDX50Q9BQ39 737 aaKnown RBP13.29□□□□□ -0.28
VPREB3-201ENST00000248948 TMEM51Q9NW97 253 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 MYO6Q9UM54 1294 aa13.29□□□□□ -0.28
VPREB3-201ENST00000248948 TNRC6BQ9UPQ9 1833 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 RIF1Q5UIP0 2472 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 TYW5A2RUC4 315 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 TBC1D3BA6NDS4 549 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 ACSL4O60488 711 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 TRUB2O95900 331 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 CYP1A1P04798 512 aaPredicted RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 MMEP08473 750 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 HOXD9P28356 352 aaPredicted RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 DGKEP52429 567 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 SLC6A3Q01959 620 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 EIF4EBP2Q13542 120 aaPredicted RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 E2F5Q15329 346 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 C2orf27AQ580R0 203 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 FAM133BQ5BKY9 247 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 EOGTQ5NDL2 527 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 TAF3Q5VWG9 929 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 SYPL2Q5VXT5 272 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 OR6B2Q6IFH4 312 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 ASCL5Q7RTU5 278 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 CACNA2D4Q7Z3S7 1137 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 ANKS1BQ7Z6G8 1248 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 ALYREFQ86V81 257 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 SFTPA1Q8IWL2 248 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 ZNF513Q8N8E2 541 aaPredicted RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 IL17RCQ8NAC3 791 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 SLC20A1Q8WUM9 679 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 P2RY11Q96G91 374 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 FAM204AQ9H8W3 233 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 CBX8Q9HC52 389 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 RRN3Q9NYV6 651 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 STAP1Q9ULZ2 295 aa13.28□□□□□ -0.28
VPREB3-201ENST00000248948 SMG5Q9UPR3 1016 aaKnown RBP13.28□□□□□ -0.28
VPREB3-201ENST00000248948 NPC1O15118 1278 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 CISD3P0C7P0 127 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 CCDC172P0C7W6 258 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 SLC2A3P11169 496 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 FERP16591 822 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 GBP1P32455 592 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 FNTBP49356 437 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 CDK17Q00537 523 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 FMO1Q01740 532 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DMWDQ09019 674 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 CRY1Q16526 586 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DCAF6Q58WW2 860 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 ARCQ7LC44 396 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 RASSF3Q86WH2 238 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 ERICH1Q86X53 443 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DEFB106AQ8N104 65 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 ALLCQ8N6M5 410 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 SUMF1Q8NBK3 374 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 HJURPQ8NCD3 748 aaPredicted RBP13.27□□□□□ -0.29
VPREB3-201ENST00000248948 TSTD1Q8NFU3 115 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 ADAM32Q8TC27 787 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DDI1Q8WTU0 396 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 BHMTQ93088 406 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 C18orf8Q96DM3 657 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 BTN2A3PQ96KV6 586 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 PRICKLE1Q96MT3 831 aaPredicted RBP13.27□□□□□ -0.29
VPREB3-201ENST00000248948 HHIPQ96QV1 700 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DDIT4Q9NX09 232 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 PLK2Q9NYY3 685 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 EBF1Q9UH73 591 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 DOCK4Q8N1I0 1966 aa13.27□□□□□ -0.29
VPREB3-201ENST00000248948 GOLGA6L19H0YKK7 550 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 TRIM24O15164 1050 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 KLF8O95600 359 aaPredicted RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 SERPINC1P01008 464 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 MMP8P22894 467 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 CCR1P32246 355 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 NOS2P35228 1153 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 TIE1P35590 1138 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 MATKP42679 507 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 GSCP56915 257 aaPredicted RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 CENPCQ03188 943 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 TAF5Q15542 800 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 FAM102AQ5T9C2 384 aaPredicted RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 PIK3R6Q5UE93 754 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 NAA35Q5VZE5 725 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 LUZP1Q86V48 1076 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 XYLT1Q86Y38 959 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 TXNDC5Q8NBS9 432 aaKnown RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 WFIKKN2Q8TEU8 576 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 PGAP3Q96FM1 320 aaPredicted RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 POLMQ9NP87 494 aaPredicted RBP13.26□□□□□ -0.29
VPREB3-201ENST00000248948 PAXBP1Q9Y5B6 917 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 FRYLO94915 3013 aa13.26□□□□□ -0.29
VPREB3-201ENST00000248948 RALGAPA1Q6GYQ0 2036 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 CEP192Q8TEP8 1941 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 PRRT4C9JH25 899 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 SGK1O00141 431 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 AXIN1O15169 862 aa13.25□□□□□ -0.29
VPREB3-201ENST00000248948 TEX33O43247 280 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms