RNA–Protein interactions for RNA: ENST00000243108.4

HOXC6-201, Transcript of homeobox C6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC6, Length 1,733 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-201ENST00000243108 TSSK4Q6SA08 328 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 DENND5BQ6ZUT9 1274 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 NAP1L3Q99457 506 aaPredicted RBP18.14■□□□□ 0.49
HOXC6-201ENST00000243108 CHRDQ9H2X0 955 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 ZMYM5Q9UJ78 669 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 SCINQ9Y6U3 715 aa18.14■□□□□ 0.49
HOXC6-201ENST00000243108 ATG2BQ96BY7 2078 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 SOBPA7XYQ1 873 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 KRIT1O00522 736 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 SPOPO43791 374 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 CILPO75339 1184 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 FGGP02679 453 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 MYBL2P10244 700 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 KPNA1P52294 538 aaPredicted RBP18.13■□□□□ 0.49
HOXC6-201ENST00000243108 RAD23BP54727 409 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 SLC7A5Q01650 507 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF394Q53GI3 561 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 MMS22LQ6ZRQ5 1243 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 HDXQ7Z353 690 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 ARL14EPQ8N8R7 260 aaPredicted RBP18.13■□□□□ 0.49
HOXC6-201ENST00000243108 TMEM35BQ8NCS4 154 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 WHAMMQ8TF30 809 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 C8orf48Q96LL4 319 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 KCNK16Q96T55 309 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 TTLL2Q9BWV7 592 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 EBF3Q9H4W6 596 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 MRPL47Q9HD33 250 aaKnown RBP18.13■□□□□ 0.49
HOXC6-201ENST00000243108 GDF3Q9NR23 364 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 SPTBN4Q9H254 2564 aa18.13■□□□□ 0.49
HOXC6-201ENST00000243108 NCAM2O15394 837 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 LAMTOR5O43504 91 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 SLC1A1P43005 524 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 MAGEA9P43362 315 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 CSTF1Q05048 431 aaKnown RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 INCA1Q0VD86 236 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 MAMLD1Q13495 774 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF268Q14587 947 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 ACOT1Q86TX2 421 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 CPNE8Q86YQ8 564 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 KRT222Q8N1A0 295 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 TTC39CQ8N584 583 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 AENQ8WTP8 325 aaKnown RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 AP1M1Q9BXS5 423 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 LHX5Q9H2C1 402 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 C8orf33Q9H7E9 229 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 OTOGLQ3ZCN5 2332 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 GPR179Q6PRD1 2367 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 BHMG1C9JSJ3 638 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 TRIM66O15016 1216 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 RAD51CO43502 376 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 MED7O43513 233 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 CALB1P05937 261 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 GLI1P08151 1106 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 ARSAP15289 507 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 PLA2G4AP47712 749 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 MRPS25P82663 173 aaKnown RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF77Q15935 545 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 C2CD6Q53TS8 623 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 RALGPS2Q86X27 583 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 WDTC1Q8N5D0 677 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 SLC4A11Q8NBS3 891 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 CEP295NLQ96MC4 621 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 TRIM7Q9C029 511 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 ELOVL4Q9GZR5 314 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 PRMT8Q9NR22 394 aaPredicted RBP18.12■□□□□ 0.49
HOXC6-201ENST00000243108 PARVAQ9NVD7 372 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 C2orf42Q9NWW7 574 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 FBXO4Q9UKT5 387 aa18.12■□□□□ 0.49
HOXC6-201ENST00000243108 TCRBV5S1A1TA0A578 114 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF840PA6NDX5 716 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 MYO1FO00160 1098 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 PROSCO94903 275 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 HEXIM1O94992 359 aaKnown RBP18.11■□□□□ 0.49
HOXC6-201ENST00000243108 CKMP06732 381 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 TDGF1P13385 188 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 NDST1P52848 882 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF211Q13398 564 aaPredicted RBP18.11■□□□□ 0.49
HOXC6-201ENST00000243108 PON2Q15165 354 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 PPP2R5EQ16537 467 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 ITPRIPL2Q3MIP1 535 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 Q6ZS52 159 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 KLHL7Q8IXQ5 586 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 IFT20Q8IY31 132 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 FUKQ8N0W3 1084 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 C1orf131Q8NDD1 294 aaKnown RBP18.11■□□□□ 0.49
HOXC6-201ENST00000243108 NELL1Q92832 810 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 TWNKQ96RR1 684 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 RNF38Q9H0F5 515 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 KIF9Q9HAQ2 790 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 THG1LQ9NWX6 298 aaKnown RBP18.11■□□□□ 0.49
HOXC6-201ENST00000243108 CEP83Q9Y592 693 aa18.11■□□□□ 0.49
HOXC6-201ENST00000243108 TRAV19A0A0A6YYK7 116 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 SART1O43290 800 aaKnown RBP18.1■□□□□ 0.49
HOXC6-201ENST00000243108 HOXC13P31276 330 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 TAF10Q12962 218 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 RUNX3Q13761 415 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 CASP8Q14790 479 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 ZNF528Q3MIS6 628 aa18.1■□□□□ 0.49
HOXC6-201ENST00000243108 NAIF1Q69YI7 327 aaPredicted RBP18.1■□□□□ 0.49
HOXC6-201ENST00000243108 FAM35AQ86V20 835 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms