RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 USP29Q9HBJ7 922 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ARHGEF38Q9NXL2 777 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 CLIC5Q9NZA1 410 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 HSFX1Q9UBD0 423 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ANAPC5Q9UJX4 755 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 GREB1Q4ZG55 1949 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 SLC38A8A6NNN8 435 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 H7C0C1 242 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 EEF2KO00418 725 aaKnown RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 MSI1O43347 362 aaKnown RBP15.75■□□□□ 0.11
HDHD3-201ENST00000238379 MAP3K6O95382 1288 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 HSD17B3P37058 310 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ATP5OP48047 213 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 PSEN1P49768 467 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 XRCC4Q13426 336 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 IZUMO3Q5VZ72 239 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ALS2CLQ60I27 953 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 KRT222Q8N1A0 295 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 RNF34Q969K3 372 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ZBTB9Q96C00 473 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 SERPINB11Q96P15 392 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 TTLL2Q9BWV7 592 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 OSBPL2Q9H1P3 480 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 AAASQ9NRG9 546 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 DTLQ9NZJ0 730 aa15.75■□□□□ 0.11
HDHD3-201ENST00000238379 ZNF638Q14966 1978 aaKnown RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 BCLAF3A2AJT9 711 aaKnown RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 GOLGA6BA6NDN3 693 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 DNALI1O14645 258 aaPredicted RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 DCLK1O15075 740 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 URODP06132 367 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 ZDHHC11BP0C7U3 371 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 CCR1P32246 355 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 RPL22P35268 128 aaKnown RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 ZNF135P52742 658 aaPredicted RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 RAB33AQ14088 237 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 PPP2R5DQ14738 602 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 RASIP1Q5U651 963 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 HIBCHQ6NVY1 386 aaPredicted RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 GPR65Q8IYL9 337 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 C7orf61Q8IZ16 206 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 FIBCD1Q8N539 461 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 OLFM3Q96PB7 478 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 TLR8Q9NR97 1041 aaKnown RBP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.74■□□□□ 0.11
HDHD3-201ENST00000238379 OR12D3Q9UGF7 316 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 ATP8A1Q9Y2Q0 1164 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 INSL6Q9Y581 213 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 PCDHB12Q9Y5F1 795 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 SNX10Q9Y5X0 201 aa15.74■□□□□ 0.11
HDHD3-201ENST00000238379 LILRB3O75022 631 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 FGF18O76093 207 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 RARGP13631 454 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 NRLP54845 237 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 PAFAH1B3Q15102 231 aaKnown RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 CFAP58Q5T655 872 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 PSRC1Q6PGN9 363 aaPredicted RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 AUTS2Q8WXX7 1259 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 CLP1Q92989 425 aaKnown RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 RTP4Q96DX8 246 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 SLC39A13Q96H72 371 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 HAPLN3Q96S86 360 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 TMEM51Q9NW97 253 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 TPX2Q9ULW0 747 aaKnown RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 KIAA1671Q9BY89 1806 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 CFAP69A5D8W1 941 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 KCNU1A8MYU2 1149 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 H3BQF6 201 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 LRIG2O94898 1065 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 ERCC2P18074 760 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 DNAJB2P25686 324 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 RBL1P28749 1068 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 GGCXP38435 758 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 TPI1P60174 286 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 SLC45A4Q5BKX6 768 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 SPDYCQ5MJ68 293 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 ZIM3Q96PE6 472 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 ZBED2Q9BTP6 218 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 UBE2OQ9C0C9 1292 aaKnown RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 MRPL17Q9NRX2 175 aaKnown RBP15.73■□□□□ 0.11
HDHD3-201ENST00000238379 TLR6Q9Y2C9 796 aa15.73■□□□□ 0.11
HDHD3-201ENST00000238379 KCNN4O15554 427 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 MFSD11O43934 449 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 PAGE1O75459 146 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 SYF2O95926 243 aaKnown RBP15.72■□□□□ 0.11
HDHD3-201ENST00000238379 TBX18O95935 607 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 CHKAP35790 457 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 PMS2P54278 862 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 GPS2Q13227 327 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 SLMAPQ14BN4 828 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 ARTNQ5T4W7 220 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 RNASEH2BQ5TBB1 312 aaKnown RBP15.72■□□□□ 0.11
HDHD3-201ENST00000238379 HERC6Q8IVU3 1022 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 SP7Q8TDD2 431 aaPredicted RBP15.72■□□□□ 0.11
HDHD3-201ENST00000238379 LRRN4Q8WUT4 740 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 HERVK_113Q902F9 699 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 QKIQ96PU8 341 aaKnown RBP eCLIP15.72■□□□□ 0.11
HDHD3-201ENST00000238379 EPAS1Q99814 870 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 TSPYL1Q9H0U9 437 aa15.72■□□□□ 0.11
HDHD3-201ENST00000238379 EPB41L4BQ9H329 900 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms